Click here to switch to the map view.

The map label for this gene is 21228440

Identifier: 21228440

GI number: 21228440

Start: 2795360

End: 2795560

Strand: Direct

Name: 21228440

Synonym: MM_2338

Alternate gene names: NA

Gene position: 2795360-2795560 (Clockwise)

Preceding gene: 21228439

Following gene: 21228441

Centisome position: 68.24

GC content: 52.74

Gene sequence:

>201_bases
ATGGGTTTTAATGACAGAGGAAACTCCTTCAGGGGCAGAGACAGCAACCGTGGGGGTTTCAGAGGCGGCAACAGCGGCCC
CAGAGAAATGACTAAAGTTACCTGTTCTGACTGCGGTGTTGAGACCGAGGTTCCTTTCAAGCCAACAGAAGGCAGGCCGG
TTTACTGCAGAGAGTGCCTTCCTAACCACAGGAAGTTCTGA

Upstream 100 bases:

>100_bases
ATCCTGTTATTAAAAACTCGCTTTTGTTTTTAATCAAAGAGCTCTATACAATCTTATTTTTAACTAATAAATATCCGTTA
TATGCGGAGGTGAAACAAAA

Downstream 100 bases:

>100_bases
TGATAATGTGCATTGAGTATTAATTATTGCAATTTATTTGCATAATACTCAATTCATTTTTCACTTTTTATTTTTTAGCC
CTTTGTCTTCGCTTCGTTTT

Product: DNA-directed RNA polymerase subunit

Products: diphosphate; RNAn+1

Alternate protein names: None

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MGFNDRGNSFRGRDSNRGGFRGGNSGPREMTKVTCSDCGVETEVPFKPTEGRPVYCRECLPNHRKF

Sequences:

>Translated_66_residues
MGFNDRGNSFRGRDSNRGGFRGGNSGPREMTKVTCSDCGVETEVPFKPTEGRPVYCRECLPNHRKF
>Mature_65_residues
GFNDRGNSFRGRDSNRGGFRGGNSGPREMTKVTCSDCGVETEVPFKPTEGRPVYCRECLPNHRKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.6

Molecular weight: Translated: 7399; Mature: 7268

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFNDRGNSFRGRDSNRGGFRGGNSGPREMTKVTCSDCGVETEVPFKPTEGRPVYCRECL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCEEHHCCC
PNHRKF
CCCCCC
>Mature Secondary Structure 
GFNDRGNSFRGRDSNRGGFRGGNSGPREMTKVTCSDCGVETEVPFKPTEGRPVYCRECL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCEEHHCCC
PNHRKF
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nucleoside triphosphate; RNAn

Specific reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA