| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228429
Identifier: 21228429
GI number: 21228429
Start: 2784704
End: 2784910
Strand: Direct
Name: 21228429
Synonym: MM_2327
Alternate gene names: NA
Gene position: 2784704-2784910 (Clockwise)
Preceding gene: 21228428
Following gene: 21228430
Centisome position: 67.98
GC content: 43.48
Gene sequence:
>207_bases GTGGATGACATGATTTGCAAGTACTGTAAAGACACGGTTACCAGACTTATTACCTCTATTAGCGGGGTTTCATGTGTAAA TGTGAATGTACCGGAAAGGACGGTAAACGTGACTTATGACAGCCGGATAACTGATGCACACGTCATCAGGATGACCCTGC TCGAAGCGGGTTATAAAAATGTAAGAGAGCCCATGAACGCTTTTTAA
Upstream 100 bases:
>100_bases ATATAGTAAAAGGCACAGATTTTTATAATATGGGTGAAGCGCCTGTTTAAAAAGCAGCTGATGATCCGGGGGTGAAGACA CGGGGGAGACAACATTTGTA
Downstream 100 bases:
>100_bases GCGCCAGGGAAGTCTGAAAAAACTGGATAGGCGGCATATCCGATGGAACTTGCGATAGGAGTTTACGGCATGACCTGTGG TCACTGCCAGAAAAGAGTAG
Product: COP associated protein
Products: NA
Alternate protein names: COP Associated Protein
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MDDMICKYCKDTVTRLITSISGVSCVNVNVPERTVNVTYDSRITDAHVIRMTLLEAGYKNVREPMNAF
Sequences:
>Translated_68_residues MDDMICKYCKDTVTRLITSISGVSCVNVNVPERTVNVTYDSRITDAHVIRMTLLEAGYKNVREPMNAF >Mature_68_residues MDDMICKYCKDTVTRLITSISGVSCVNVNVPERTVNVTYDSRITDAHVIRMTLLEAGYKNVREPMNAF
Specific function: Unknown
COG id: COG2608
COG function: function code P; Copper chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7700; Mature: 7700
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDMICKYCKDTVTRLITSISGVSCVNVNVPERTVNVTYDSRITDAHVIRMTLLEAGYKN CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH VREPMNAF HHHHHCCC >Mature Secondary Structure MDDMICKYCKDTVTRLITSISGVSCVNVNVPERTVNVTYDSRITDAHVIRMTLLEAGYKN CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH VREPMNAF HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA