| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is echA [H]
Identifier: 21228422
GI number: 21228422
Start: 2778411
End: 2780327
Strand: Direct
Name: echA [H]
Synonym: MM_2320
Alternate gene names: 21228422
Gene position: 2778411-2780327 (Clockwise)
Preceding gene: 21228421
Following gene: 21228423
Centisome position: 67.83
GC content: 41.99
Gene sequence:
>1917_bases ATGATAGAAACAACAGTAATGCTATTAATCGCAGTACCCCTACTTTTTTCGTTTTTATTCCTGGGTCTTGGCAAAAGTAT GTACAAAGTTCTTGCCTGGGCTTTCTTTGTATTTGGGGTAATTGCTTCAGTTCAGTTAGTTCGGGATGGTGTTGGTGTTT ATGAAATAACTGGACCAGATTTTGCAATGTTAGAAAATGTTGTCCTTGTACTCGAAGTACTGGTTATACTATTCATTCTT GCTGTGTCAGCAAAATACAAAAACTGGCCTACACTTGTACTCGGAATAATTTCAGCAGCTGTATTTGCCTACACTTTTAC TAATGCTCCGCATGCTGAAAGCGCTGTTTTTAATATTGATCAATTTTCTCAGGTAATGATATTAATTGTCAATATAGTCG GTACTGCGATCATACTATTCGCAACCGGTTATATGGATGAATATGAAGAACACAGGCATTTAAACAGACAGAGAACATTC TATTTCACAATGAGTTTCTTCCTGGCATCCATGAACGGTCTTGTCATGGCTGACACTCTCGGATGGCTGTTTCTCTTCTG GGAACTGACAACTCTTTGTTCATTCGTCTTGATCTCATACAACATGGACCAGGAAGGAATAAACAATGGTTTCAGAGCTC TGGCTTTAAACCTGGTTGGTGGAATTGCTTTATCTGTAGGCATAATTATTCTAGCTCTAAATTATGATATAGGCACCCTT TCCGGAATTGGAATTTACGCTGGAACTGATGCAACAGCGATGGCCGCTGTAGCCCTTCCCGTTGCCTTACTCTGTATCGG AGGCTTTGCGAAATCCGCTCAGATGCCCTTCCAGAGCTGGCTCCTGGGTGCAATGGTAGCTCCAACTCCGGTTTCTGCCT TACTGCACTCAAGCACAATGGTTAATGCCGGTGTGTTTTTAGTCGTCAAACTTGTACCAGCTTTTGCGGGCTCAAGTCTC GGTACAGCTATTGCAGTTTACGGAAGCTTTACCTTCGTCATGTGCTCGGCTTTAGCCTTATCCCAGAGAAACGCAAAAAG AGTTCTCGCTTATTCTACAATTGCAAACCTGGGATTAATTATCGCAAGTGCAGGAATTGGTACACCTCTGGCTGTAGCTG CTGCAATTATGCTTATCCTGTTCCACGCAATATCCAAAGCTCTTCTCTTCCTCTGCACAGGTGAAATTGAGCACACCATA GGAAGCAGAGATATTGAAGACATGGCAGGGTTAATTAAAAAGGCTCCATATCTCACAACCCTTGCAGCGCTGGGAATGGT ATCCATGCTGTTGCCTCCTTTTGGTGTGCTGCTCACAAAATGGGTGTCGATGGAAGCTGCTTCTAACAACCCTATTGTGA TAGTCTTCCTTATACTCGGAAGTGCACTCACAACAGTGTATTATGCTAAATGGCTCGGAACAATCCTGTCCTCAACCATG GATAAATATGCAGTTCACAACAAGAGAGCGGAAACATATTTCCCACTTTCAGTCCTCGGGTTTTCAATTGTAGTTTCAAG CGTTCTTGTGTTTTCAATATATGACTACTTCATCAAACCTCAGGTTGAAATACTGCTCAATACTGCTCCTGCTATTTCAG GAGAAGCCGGACAATTCACCTCTGAAATAGGGGCATTTGCTTATGCAGCAATATTCGCAGTGCTTGCTCTGGCTATTATC CTCTATCTCGCTACAAGAAGCATGTTCACTCCACGTATGGCTGGATATTACATGTGTGGAGAAAACAACATGGAAAGGGA CAAATTAATGTTCAGAAATGGGCTTTGCACCTACGATAAAAGTAATGTCTCCAATATATATCTCCAGAACACTTTTGGAG AAAATAAACTTACAACGCTTGGATATGCAATTTCCATAATTCTTATTGTAATTGCATTGGCAGGAGGGGTACTATAA
Upstream 100 bases:
>100_bases AAAGCTTATTGAGTTTGATTTTATTCTTCAAGTGCGTAAGTCCCAACAGTATAGGTCAAAGGTAAATCGATAGGAGGAAA TAGGTCGGAGGATACGTTGT
Downstream 100 bases:
>100_bases TGGTAGCTATGAACGATGTTTTGCTAGCTATTCTTGTTCTGATTGGTGCTCCTATCATAGGCTGTTTAGCTTCGGGGATT GACAGGAAAATCACTGCAAG
Product: ech hydrogenase subunit
Products: NA
Alternate protein names: Mrp complex subunit A; Multiple resistance and pH homeostasis protein A [H]
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MIETTVMLLIAVPLLFSFLFLGLGKSMYKVLAWAFFVFGVIASVQLVRDGVGVYEITGPDFAMLENVVLVLEVLVILFIL AVSAKYKNWPTLVLGIISAAVFAYTFTNAPHAESAVFNIDQFSQVMILIVNIVGTAIILFATGYMDEYEEHRHLNRQRTF YFTMSFFLASMNGLVMADTLGWLFLFWELTTLCSFVLISYNMDQEGINNGFRALALNLVGGIALSVGIIILALNYDIGTL SGIGIYAGTDATAMAAVALPVALLCIGGFAKSAQMPFQSWLLGAMVAPTPVSALLHSSTMVNAGVFLVVKLVPAFAGSSL GTAIAVYGSFTFVMCSALALSQRNAKRVLAYSTIANLGLIIASAGIGTPLAVAAAIMLILFHAISKALLFLCTGEIEHTI GSRDIEDMAGLIKKAPYLTTLAALGMVSMLLPPFGVLLTKWVSMEAASNNPIVIVFLILGSALTTVYYAKWLGTILSSTM DKYAVHNKRAETYFPLSVLGFSIVVSSVLVFSIYDYFIKPQVEILLNTAPAISGEAGQFTSEIGAFAYAAIFAVLALAII LYLATRSMFTPRMAGYYMCGENNMERDKLMFRNGLCTYDKSNVSNIYLQNTFGENKLTTLGYAISIILIVIALAGGVL
Sequences:
>Translated_638_residues MIETTVMLLIAVPLLFSFLFLGLGKSMYKVLAWAFFVFGVIASVQLVRDGVGVYEITGPDFAMLENVVLVLEVLVILFIL AVSAKYKNWPTLVLGIISAAVFAYTFTNAPHAESAVFNIDQFSQVMILIVNIVGTAIILFATGYMDEYEEHRHLNRQRTF YFTMSFFLASMNGLVMADTLGWLFLFWELTTLCSFVLISYNMDQEGINNGFRALALNLVGGIALSVGIIILALNYDIGTL SGIGIYAGTDATAMAAVALPVALLCIGGFAKSAQMPFQSWLLGAMVAPTPVSALLHSSTMVNAGVFLVVKLVPAFAGSSL GTAIAVYGSFTFVMCSALALSQRNAKRVLAYSTIANLGLIIASAGIGTPLAVAAAIMLILFHAISKALLFLCTGEIEHTI GSRDIEDMAGLIKKAPYLTTLAALGMVSMLLPPFGVLLTKWVSMEAASNNPIVIVFLILGSALTTVYYAKWLGTILSSTM DKYAVHNKRAETYFPLSVLGFSIVVSSVLVFSIYDYFIKPQVEILLNTAPAISGEAGQFTSEIGAFAYAAIFAVLALAII LYLATRSMFTPRMAGYYMCGENNMERDKLMFRNGLCTYDKSNVSNIYLQNTFGENKLTTLGYAISIILIVIALAGGVL >Mature_638_residues MIETTVMLLIAVPLLFSFLFLGLGKSMYKVLAWAFFVFGVIASVQLVRDGVGVYEITGPDFAMLENVVLVLEVLVILFIL AVSAKYKNWPTLVLGIISAAVFAYTFTNAPHAESAVFNIDQFSQVMILIVNIVGTAIILFATGYMDEYEEHRHLNRQRTF YFTMSFFLASMNGLVMADTLGWLFLFWELTTLCSFVLISYNMDQEGINNGFRALALNLVGGIALSVGIIILALNYDIGTL SGIGIYAGTDATAMAAVALPVALLCIGGFAKSAQMPFQSWLLGAMVAPTPVSALLHSSTMVNAGVFLVVKLVPAFAGSSL GTAIAVYGSFTFVMCSALALSQRNAKRVLAYSTIANLGLIIASAGIGTPLAVAAAIMLILFHAISKALLFLCTGEIEHTI GSRDIEDMAGLIKKAPYLTTLAALGMVSMLLPPFGVLLTKWVSMEAASNNPIVIVFLILGSALTTVYYAKWLGTILSSTM DKYAVHNKRAETYFPLSVLGFSIVVSSVLVFSIYDYFIKPQVEILLNTAPAISGEAGQFTSEIGAFAYAAIFAVLALAII LYLATRSMFTPRMAGYYMCGENNMERDKLMFRNGLCTYDKSNVSNIYLQNTFGENKLTTLGYAISIILIVIALAGGVL
Specific function: Mnh complex is a Na(+)Li(+)/H(+) antiporter involved in Na(+) and/or Li(+) excretion and Na(+) resistance. Na(+)/H(+) antiport consumes a transmembrane electrical potential, and is thus inferred to be electrogenic. Does not transport K(+), Ca(2+) or Mg(2+
COG id: COG1009
COG function: function code CP; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit A family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=330, Percent_Identity=33.9393939393939, Blast_Score=137, Evalue=3e-32, Organism=Escherichia coli, GI1788829, Length=382, Percent_Identity=29.3193717277487, Blast_Score=140, Evalue=4e-34, Organism=Escherichia coli, GI1788614, Length=307, Percent_Identity=34.5276872964169, Blast_Score=132, Evalue=9e-32, Organism=Escherichia coli, GI1788827, Length=473, Percent_Identity=24.3128964059197, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1788831, Length=353, Percent_Identity=26.0623229461756, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1788613, Length=317, Percent_Identity=23.9747634069401, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI2367154, Length=208, Percent_Identity=29.3269230769231, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005663 - InterPro: IPR001750 - InterPro: IPR001516 [H]
Pfam domain/function: PF00361 Oxidored_q1; PF00662 Oxidored_q1_N [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 68797; Mature: 68797
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIETTVMLLIAVPLLFSFLFLGLGKSMYKVLAWAFFVFGVIASVQLVRDGVGVYEITGPD CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC FAMLENVVLVLEVLVILFILAVSAKYKNWPTLVLGIISAAVFAYTFTNAPHAESAVFNID HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEECHH QFSQVMILIVNIVGTAIILFATGYMDEYEEHRHLNRQRTFYFTMSFFLASMNGLVMADTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEHHHHH GWLFLFWELTTLCSFVLISYNMDQEGINNGFRALALNLVGGIALSVGIIILALNYDIGTL HHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC SGIGIYAGTDATAMAAVALPVALLCIGGFAKSAQMPFQSWLLGAMVAPTPVSALLHSSTM CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHH VNAGVFLVVKLVPAFAGSSLGTAIAVYGSFTFVMCSALALSQRNAKRVLAYSTIANLGLI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH IASAGIGTPLAVAAAIMLILFHAISKALLFLCTGEIEHTIGSRDIEDMAGLIKKAPYLTT HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCHHHHH LAALGMVSMLLPPFGVLLTKWVSMEAASNNPIVIVFLILGSALTTVYYAKWLGTILSSTM HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH DKYAVHNKRAETYFPLSVLGFSIVVSSVLVFSIYDYFIKPQVEILLNTAPAISGEAGQFT HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCHHH SEIGAFAYAAIFAVLALAIILYLATRSMFTPRMAGYYMCGENNMERDKLMFRNGLCTYDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCC SNVSNIYLQNTFGENKLTTLGYAISIILIVIALAGGVL CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIETTVMLLIAVPLLFSFLFLGLGKSMYKVLAWAFFVFGVIASVQLVRDGVGVYEITGPD CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC FAMLENVVLVLEVLVILFILAVSAKYKNWPTLVLGIISAAVFAYTFTNAPHAESAVFNID HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEECHH QFSQVMILIVNIVGTAIILFATGYMDEYEEHRHLNRQRTFYFTMSFFLASMNGLVMADTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEHHHHH GWLFLFWELTTLCSFVLISYNMDQEGINNGFRALALNLVGGIALSVGIIILALNYDIGTL HHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC SGIGIYAGTDATAMAAVALPVALLCIGGFAKSAQMPFQSWLLGAMVAPTPVSALLHSSTM CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHH VNAGVFLVVKLVPAFAGSSLGTAIAVYGSFTFVMCSALALSQRNAKRVLAYSTIANLGLI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH IASAGIGTPLAVAAAIMLILFHAISKALLFLCTGEIEHTIGSRDIEDMAGLIKKAPYLTT HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCHHHHH LAALGMVSMLLPPFGVLLTKWVSMEAASNNPIVIVFLILGSALTTVYYAKWLGTILSSTM HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH DKYAVHNKRAETYFPLSVLGFSIVVSSVLVFSIYDYFIKPQVEILLNTAPAISGEAGQFT HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCHHH SEIGAFAYAAIFAVLALAIILYLATRSMFTPRMAGYYMCGENNMERDKLMFRNGLCTYDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCC SNVSNIYLQNTFGENKLTTLGYAISIILIVIALAGGVL CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11356194 [H]