The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228401

Identifier: 21228401

GI number: 21228401

Start: 2749527

End: 2750714

Strand: Reverse

Name: 21228401

Synonym: MM_2299

Alternate gene names: NA

Gene position: 2750714-2749527 (Counterclockwise)

Preceding gene: 21228403

Following gene: 21228400

Centisome position: 67.15

GC content: 45.2

Gene sequence:

>1188_bases
ATGAAGATGAAAATGAAAATCAGCCTTGTAATCCATGGACCCGAAGTAATTGATTCGGGAGAAACGAAAATAGTTCTGGA
AAAACTTTCCTGCCTCGGCGAAGTAAAAGCGGAGCTTGGCGGAACCATGGGAAAAACAGCCGTAATTGACGCCGGGCTTG
AAGGAATCATAGATACAGGCAGGCACTTAAAGCCAAGCGTCTGCATAGAATCTTTTTTTGAAACAGCCGACCTTATTTGC
CTTCTGAACCGGGGAAAAACTCTAGAAACAGGCAAAATCTTCGGAGCAAAAGTCGCTGCCCGCCTGAAAGATCCCGAAAA
GAAGCCCCTGGTTCAGATTGAAAGCCCTGGCTGTTCCTGCGGAAAGCTTATTCCCCTGAATAAAAAAGCTGAAAGCTTTA
TTGAAAAACTCTCCGAAACCCTCAGGGTCCCTGCAGAAAACCCCCTGATTTTCCACAACCCTGTTTCCATAGAAACCTGC
GAAAAAACCGGAATAACCAGAATAATCCGCGAAATCTCAGGGGTTCTTCAGGGAGAAAATATTTTTGTAAACGGGATTGT
TATCGGAAAGGCATCATCTTCAAAAATAAGGATAATCTCCGAAAAAGGCTTCATCACTGCAATCGAAGGCGGAGAAATAA
AAGAACACGGTCTAGAAAAGCTCCATAATTACGAAAAAAGGGACCCTGTAGACCTTGCAGGAGCCTGGATAAAAAGCGGA
GACATCAGAAGAAGCAGTCCCTCACGCCCGGACGTCCGGGAACAAAACTCCAGTGCCGTCAAATCATATTTTATTTCCGG
AGACAGGGCAGGAAGTATCATACCTGGAAAAGTTGTGCTTATTGACCATGAAGCTGAGAAATCCTATGAACTCTCTGCAG
GGGCTGAGCTTGTGGTTACGGTCGGGGATGACACTACAGCCATAGCAGGAGATGTCCTTTACAGGCTTGGCATACCTATC
ATCGGGATCACAGACGGAGACTGCGACAATGTTACCTGCGAGCCAAAAACCTTTTCGGGATCGATTATCCTCAGGCTGGA
ACCTGGAAACGATGATATCGTGGGCATGAGGATAAAGAAGGAGCTTTTAAAAGGACAAAATTCGGCTGTTTTTGAGGATC
TTCTAGCTTTTAAAGAAGAGGTTCTGAAACTGGCAGAGCCTTCCATTGAGGCTGTTTTTAAATATTGA

Upstream 100 bases:

>100_bases
ATACAGGAAACAGGTTATGTTTGAAGAAAAACATAAGAAGAATACCAGCTGTAATAAAGGGTCATAATAATATGTTCCTC
TCAGTTAAAATCAAATGAAA

Downstream 100 bases:

>100_bases
AAAACCCTGACCTGCACAGCAATATTTGATATATCGGGTCATTCCTGTCCTACTCAACGAGGAAGAGCGACCAGTCAGGT
AGAGTGTTTGAGCACTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKMKMKISLVIHGPEVIDSGETKIVLEKLSCLGEVKAELGGTMGKTAVIDAGLEGIIDTGRHLKPSVCIESFFETADLIC
LLNRGKTLETGKIFGAKVAARLKDPEKKPLVQIESPGCSCGKLIPLNKKAESFIEKLSETLRVPAENPLIFHNPVSIETC
EKTGITRIIREISGVLQGENIFVNGIVIGKASSSKIRIISEKGFITAIEGGEIKEHGLEKLHNYEKRDPVDLAGAWIKSG
DIRRSSPSRPDVREQNSSAVKSYFISGDRAGSIIPGKVVLIDHEAEKSYELSAGAELVVTVGDDTTAIAGDVLYRLGIPI
IGITDGDCDNVTCEPKTFSGSIILRLEPGNDDIVGMRIKKELLKGQNSAVFEDLLAFKEEVLKLAEPSIEAVFKY

Sequences:

>Translated_395_residues
MKMKMKISLVIHGPEVIDSGETKIVLEKLSCLGEVKAELGGTMGKTAVIDAGLEGIIDTGRHLKPSVCIESFFETADLIC
LLNRGKTLETGKIFGAKVAARLKDPEKKPLVQIESPGCSCGKLIPLNKKAESFIEKLSETLRVPAENPLIFHNPVSIETC
EKTGITRIIREISGVLQGENIFVNGIVIGKASSSKIRIISEKGFITAIEGGEIKEHGLEKLHNYEKRDPVDLAGAWIKSG
DIRRSSPSRPDVREQNSSAVKSYFISGDRAGSIIPGKVVLIDHEAEKSYELSAGAELVVTVGDDTTAIAGDVLYRLGIPI
IGITDGDCDNVTCEPKTFSGSIILRLEPGNDDIVGMRIKKELLKGQNSAVFEDLLAFKEEVLKLAEPSIEAVFKY
>Mature_395_residues
MKMKMKISLVIHGPEVIDSGETKIVLEKLSCLGEVKAELGGTMGKTAVIDAGLEGIIDTGRHLKPSVCIESFFETADLIC
LLNRGKTLETGKIFGAKVAARLKDPEKKPLVQIESPGCSCGKLIPLNKKAESFIEKLSETLRVPAENPLIFHNPVSIETC
EKTGITRIIREISGVLQGENIFVNGIVIGKASSSKIRIISEKGFITAIEGGEIKEHGLEKLHNYEKRDPVDLAGAWIKSG
DIRRSSPSRPDVREQNSSAVKSYFISGDRAGSIIPGKVVLIDHEAEKSYELSAGAELVVTVGDDTTAIAGDVLYRLGIPI
IGITDGDCDNVTCEPKTFSGSIILRLEPGNDDIVGMRIKKELLKGQNSAVFEDLLAFKEEVLKLAEPSIEAVFKY

Specific function: Unknown

COG id: COG4069

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012032 [H]

Pfam domain/function: PF09890 DUF2117 [H]

EC number: NA

Molecular weight: Translated: 42753; Mature: 42753

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKMKISLVIHGPEVIDSGETKIVLEKLSCLGEVKAELGGTMGKTAVIDAGLEGIIDTG
CCEEEEEEEEEECCHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCC
RHLKPSVCIESFFETADLICLLNRGKTLETGKIFGAKVAARLKDPEKKPLVQIESPGCSC
CCCCHHHHHHHHHHHHCEEEEECCCCEEECCCCHHHHHHHHHCCCCCCCEEEECCCCCCC
GKLIPLNKKAESFIEKLSETLRVPAENPLIFHNPVSIETCEKTGITRIIREISGVLQGEN
CCEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEHHHHCCHHHHHHHHHHHCCCCE
IFVNGIVIGKASSSKIRIISEKGFITAIEGGEIKEHGLEKLHNYEKRDPVDLAGAWIKSG
EEEEEEEEECCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCC
DIRRSSPSRPDVREQNSSAVKSYFISGDRAGSIIPGKVVLIDHEAEKSYELSAGAELVVT
CCCCCCCCCCCHHHCCHHHHHHHEECCCCCCCCCCCEEEEEECCCCCCEEECCCCEEEEE
VGDDTTAIAGDVLYRLGIPIIGITDGDCDNVTCEPKTFSGSIILRLEPGNDDIVGMRIKK
ECCCCHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCCCCEEEEEEECCCCCEEEHHHHH
ELLKGQNSAVFEDLLAFKEEVLKLAEPSIEAVFKY
HHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCC
>Mature Secondary Structure
MKMKMKISLVIHGPEVIDSGETKIVLEKLSCLGEVKAELGGTMGKTAVIDAGLEGIIDTG
CCEEEEEEEEEECCHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCC
RHLKPSVCIESFFETADLICLLNRGKTLETGKIFGAKVAARLKDPEKKPLVQIESPGCSC
CCCCHHHHHHHHHHHHCEEEEECCCCEEECCCCHHHHHHHHHCCCCCCCEEEECCCCCCC
GKLIPLNKKAESFIEKLSETLRVPAENPLIFHNPVSIETCEKTGITRIIREISGVLQGEN
CCEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEHHHHCCHHHHHHHHHHHCCCCE
IFVNGIVIGKASSSKIRIISEKGFITAIEGGEIKEHGLEKLHNYEKRDPVDLAGAWIKSG
EEEEEEEEECCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCC
DIRRSSPSRPDVREQNSSAVKSYFISGDRAGSIIPGKVVLIDHEAEKSYELSAGAELVVT
CCCCCCCCCCCHHHCCHHHHHHHEECCCCCCCCCCCEEEEEECCCCCCEEECCCCEEEEE
VGDDTTAIAGDVLYRLGIPIIGITDGDCDNVTCEPKTFSGSIILRLEPGNDDIVGMRIKK
ECCCCHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCCCCEEEEEEECCCCCEEEHHHHH
ELLKGQNSAVFEDLLAFKEEVLKLAEPSIEAVFKY
HHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]