| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21228393
Identifier: 21228393
GI number: 21228393
Start: 2731443
End: 2732159
Strand: Reverse
Name: 21228393
Synonym: MM_2291
Alternate gene names: NA
Gene position: 2732159-2731443 (Counterclockwise)
Preceding gene: 21228394
Following gene: 21228385
Centisome position: 66.7
GC content: 45.19
Gene sequence:
>717_bases ATGACCACGCAGATTGAACTCGGGGATATCACAGTAGACGTAGTGCTCAAGGATATCAAAAACATTCACCTGAGTGTGTA TCCTCCTAATGGCAGAGTCAAAATATCTGCGCCCCTGCGAATGGATATAGATACAATTCGTGTATTCGCTATCTCCAGGC TGGGATGGATCAAGCAACAAAGGAAAAAGTTCCAGGAACAGGAGCGTGAAACTCCTCGCGAGTATCTGGACCTTGAAAGT CATTACGTGTGGGGGAAGCGCTATTTGCTCAAGGTGATCGAAGTCAATGAAGCTCCATCAGTCGAATTAAAACACAGCAA AATGATCCTGCGGGTGCGTCCCGGAACAGACGATAAAAAAAGGCAGTCTATTATTGATGCATGGTATCGCGAGCAGCTCA AAAAAGCTATACCGCCATTAATTGCCAGATGGGAACCACTGCTGGGCGTGAAGGTAGAGCGGTTCTTTGTGCAGCGGATG AGAACAAAATGGGGAAGCTGTAACCATAAAGCACGTAACATCAGGCTCAATACCGAGCTTGCCAAAAAACCAGAAGAGTG TCTCGAATATACCATTGTGCATGAAATGGCACATATACTGGAGCCAACGCACAATTCTCACTTTATCACGCTAATGGACC AGTTCATGCCAAAATGGCAATTTTGCAGGGATAGATTGAATCAATTACCTGTTAGGCATGAGGACTGGATTTATTGA
Upstream 100 bases:
>100_bases CCCGTGAACGGGTAATCAAGAAAGCCATACATGATGTCTTGAATGATGTAGACGAGGTAGAGCGCATCTTCTTAATTATA AAGGCACAAAAGGAATACTG
Downstream 100 bases:
>100_bases TACAATTTCCTAGAAGCTTGGATTAAGAAATTAATTCTATTTTCCGTCTCAAGCTCAATGCATTTTTTATAAAATTTAGA AGATATTGACTCCGCAGTAG
Product: Zinc metalloprotease
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc-Dependent Protease; Phosphonate Metabolism Protein PhnI; Peptidase; Zinc Metallopeptidase
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTTQIELGDITVDVVLKDIKNIHLSVYPPNGRVKISAPLRMDIDTIRVFAISRLGWIKQQRKKFQEQERETPREYLDLES HYVWGKRYLLKVIEVNEAPSVELKHSKMILRVRPGTDDKKRQSIIDAWYREQLKKAIPPLIARWEPLLGVKVERFFVQRM RTKWGSCNHKARNIRLNTELAKKPEECLEYTIVHEMAHILEPTHNSHFITLMDQFMPKWQFCRDRLNQLPVRHEDWIY
Sequences:
>Translated_238_residues MTTQIELGDITVDVVLKDIKNIHLSVYPPNGRVKISAPLRMDIDTIRVFAISRLGWIKQQRKKFQEQERETPREYLDLES HYVWGKRYLLKVIEVNEAPSVELKHSKMILRVRPGTDDKKRQSIIDAWYREQLKKAIPPLIARWEPLLGVKVERFFVQRM RTKWGSCNHKARNIRLNTELAKKPEECLEYTIVHEMAHILEPTHNSHFITLMDQFMPKWQFCRDRLNQLPVRHEDWIY >Mature_237_residues TTQIELGDITVDVVLKDIKNIHLSVYPPNGRVKISAPLRMDIDTIRVFAISRLGWIKQQRKKFQEQERETPREYLDLESH YVWGKRYLLKVIEVNEAPSVELKHSKMILRVRPGTDDKKRQSIIDAWYREQLKKAIPPLIARWEPLLGVKVERFFVQRMR TKWGSCNHKARNIRLNTELAKKPEECLEYTIVHEMAHILEPTHNSHFITLMDQFMPKWQFCRDRLNQLPVRHEDWIY
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28493; Mature: 28361
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQIELGDITVDVVLKDIKNIHLSVYPPNGRVKISAPLRMDIDTIRVFAISRLGWIKQQ CCCEEEECCCHHHHHHHHHCCCEEEEECCCCEEEEECCCEECHHHHHHHHHHHHHHHHHH RKKFQEQERETPREYLDLESHYVWGKRYLLKVIEVNEAPSVELKHSKMILRVRPGTDDKK HHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCHHH RQSIIDAWYREQLKKAIPPLIARWEPLLGVKVERFFVQRMRTKWGSCNHKARNIRLNTEL HHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHH AKKPEECLEYTIVHEMAHILEPTHNSHFITLMDQFMPKWQFCRDRLNQLPVRHEDWIY HCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTQIELGDITVDVVLKDIKNIHLSVYPPNGRVKISAPLRMDIDTIRVFAISRLGWIKQQ CCEEEECCCHHHHHHHHHCCCEEEEECCCCEEEEECCCEECHHHHHHHHHHHHHHHHHH RKKFQEQERETPREYLDLESHYVWGKRYLLKVIEVNEAPSVELKHSKMILRVRPGTDDKK HHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCHHH RQSIIDAWYREQLKKAIPPLIARWEPLLGVKVERFFVQRMRTKWGSCNHKARNIRLNTEL HHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHH AKKPEECLEYTIVHEMAHILEPTHNSHFITLMDQFMPKWQFCRDRLNQLPVRHEDWIY HCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHHHCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA