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The map label for this gene is rps7p [H]

Identifier: 21228368

GI number: 21228368

Start: 2692946

End: 2693515

Strand: Reverse

Name: rps7p [H]

Synonym: MM_2266

Alternate gene names: 21228368

Gene position: 2693515-2692946 (Counterclockwise)

Preceding gene: 21228369

Following gene: 21228367

Centisome position: 65.75

GC content: 49.3

Gene sequence:

>570_bases
ATGATTTTTTTGTACAAGATTTTTGGGAAATGGGACCCTACGGAAGTTGAGGTCAGGGATCTCGGAATTAAGCGCTATGT
CAGTCTTGCACCTGTAATTGTTCCGCACAGCAGTGGGAAACATGCCAGGCAGCAGTTTAACAAATCCGAAATTTCCATTG
TAGAGCGCCTCGCAAACAACCTCATGAGGACAGAAACAAACACTGGAAAGAAGCAGGTGACCCTCCGCGCAGTCGAAGAG
GCTTTTGATATCATCAACAGGAAGACCCAGCAGAACCCTATCCAGATTCTCGTGGACGCCATTGCAAATGCAGGCCCCAG
AGAAGAAGTGGTCAGGCTGAAGTACGGCGGAATCTCGGTTCCAAAAGCAGTTGACACCGCACCTCAGAGGCGTGTTGACA
CCGCTCTTCGCTACATCAGCATGGGAACAAACGCTGCAGCCTTCAAATCCAAGCGCTCTGTTGCAGAGTGTCTTGCAACC
GAACTTATAGGTGCAGCAAACCGCGATACAAAATCCTTCTCCATCAACAGAAAGGATGCAAAGGAAAGAGTTGCGAAGGC
AGCCCGTTAA

Upstream 100 bases:

>100_bases
GTGCTATGGGTGACATTCCCGGCGTACGTTTTAAAGTAATTGCCGTAAACAACGTGTCCCTGAACCAGCTGGTCATCGGC
AGATTGGAAAAACCCAGGAG

Downstream 100 bases:

>100_bases
TCGTTTACGGGCCTTTCCTGAATAAACATATAAACATTCACATTTTGCTTAAAAGGTATTAGCATGGGACGAAGAAAGAA
AATGGTCGAGCGTGTGACAA

Product: 30S ribosomal protein S7P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MIFLYKIFGKWDPTEVEVRDLGIKRYVSLAPVIVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEE
AFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLAT
ELIGAANRDTKSFSINRKDAKERVAKAAR

Sequences:

>Translated_189_residues
MIFLYKIFGKWDPTEVEVRDLGIKRYVSLAPVIVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEE
AFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLAT
ELIGAANRDTKSFSINRKDAKERVAKAAR
>Mature_189_residues
MIFLYKIFGKWDPTEVEVRDLGIKRYVSLAPVIVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEE
AFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLAT
ELIGAANRDTKSFSINRKDAKERVAKAAR

Specific function: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center [H]

COG id: COG0049

COG function: function code J; Ribosomal protein S7

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S7P family [H]

Homologues:

Organism=Homo sapiens, GI13904870, Length=187, Percent_Identity=42.7807486631016, Blast_Score=164, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17542204, Length=186, Percent_Identity=43.5483870967742, Blast_Score=157, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6322583, Length=185, Percent_Identity=44.8648648648649, Blast_Score=165, Evalue=4e-42,
Organism=Drosophila melanogaster, GI17647897, Length=187, Percent_Identity=42.7807486631016, Blast_Score=159, Evalue=1e-39,
Organism=Drosophila melanogaster, GI21357837, Length=187, Percent_Identity=41.1764705882353, Blast_Score=155, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000235
- InterPro:   IPR005716 [H]

Pfam domain/function: PF00177 Ribosomal_S7 [H]

EC number: NA

Molecular weight: Translated: 21081; Mature: 21081

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFLYKIFGKWDPTEVEVRDLGIKRYVSLAPVIVPHSSGKHARQQFNKSEISIVERLANN
CEEEEEECCCCCCCEEHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCHHHHHHHHHHHHH
LMRTETNTGKKQVTLRAVEEAFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISV
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHEEEEECCCCCC
PKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDA
CHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHH
KERVAKAAR
HHHHHHCCC
>Mature Secondary Structure
MIFLYKIFGKWDPTEVEVRDLGIKRYVSLAPVIVPHSSGKHARQQFNKSEISIVERLANN
CEEEEEECCCCCCCEEHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCHHHHHHHHHHHHH
LMRTETNTGKKQVTLRAVEEAFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISV
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHEEEEECCCCCC
PKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDA
CHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHH
KERVAKAAR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]