| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228364
Identifier: 21228364
GI number: 21228364
Start: 2687244
End: 2688041
Strand: Reverse
Name: 21228364
Synonym: MM_2262
Alternate gene names: NA
Gene position: 2688041-2687244 (Counterclockwise)
Preceding gene: 21228365
Following gene: 21228363
Centisome position: 65.62
GC content: 42.48
Gene sequence:
>798_bases GTGCCCGGAAATCCTAATGAAATAAAACTGGTAAACAATGCTATGTCCAATGTTACCCGACGGAAGATAATGAACTTTTT ATCGGCAGGAGACAAAAGTGCTGAAGAAATCGGGGGAGAAGTGGGAAAGACTATGCTTGATTTCCATCTAAAACTCCTTC AACAGGCAAGCCTGATTGAGATTGAAGAAGGGACTGTGAGACTGAGCGAATATGGCAGAAATTTCCTTAAAGAGAAAGAG GAGAAAGGTGCAGATAAAACTGCAGATATTTCTCAGGCAAAACCAATAGAGATTACTGAGGTCAGACAGCTTTTGCCCTG TATAGCCGATTCCTCAAAGTTCAGGGTAATTGCAAATATAGCCCCTCCTCTAGGTGGAACTCTCAAGGTTCTTGAACCAC TCTTTCCCAGAGGCAAATATTCGGACAAAATAGGCGCTCTGATAATTCAAAAAGGAGAAATTATTACAACTGTTTACGGC ACTGGAAAGGTGACCATGACAATGATAAAAAGTGAGGCGGAAGCCAGAGAATCTCTCCAGAGCCTTAAAAATACTATCAA TGAAGCAATTGCAAAAGGTGTTGCTCCAGCACCAAGAGAAAAAGTCAGGGTTGAACCTATGGAGATCTACAAATACCTGC CTCAGACCAACTGTGGCAAATGTGGTGAACAGAGCTGTTATACCTTTGCAATAAAGCTTATGGGAGGAGAGATCACTCTG GACAAATGCACACCTCTAAAAGAACCGGGCTATGCAACAAACCTGGAGCATCTGCAAGTCCTTAGTGCATATATCTGA
Upstream 100 bases:
>100_bases TATTGATTAAGAGAATTGAATTTCATTTTTGGAAGAAGAACGCCTGATATTATTTTGTCAAAACATCAGTTAAATTTTTG TAACCTTCGCAGGTGGTAAA
Downstream 100 bases:
>100_bases TTAGGTTTTATGAAATTCATCTGATTGGAGCACATTAAAACACCTTGATTATAGTGCTCATTGATAGCTCTTTATCATAC TCCAGATAGGTTAAATTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Fe-S Cluster Domain Protein; Fe-S Cluster
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MPGNPNEIKLVNNAMSNVTRRKIMNFLSAGDKSAEEIGGEVGKTMLDFHLKLLQQASLIEIEEGTVRLSEYGRNFLKEKE EKGADKTADISQAKPIEITEVRQLLPCIADSSKFRVIANIAPPLGGTLKVLEPLFPRGKYSDKIGALIIQKGEIITTVYG TGKVTMTMIKSEAEARESLQSLKNTINEAIAKGVAPAPREKVRVEPMEIYKYLPQTNCGKCGEQSCYTFAIKLMGGEITL DKCTPLKEPGYATNLEHLQVLSAYI
Sequences:
>Translated_265_residues MPGNPNEIKLVNNAMSNVTRRKIMNFLSAGDKSAEEIGGEVGKTMLDFHLKLLQQASLIEIEEGTVRLSEYGRNFLKEKE EKGADKTADISQAKPIEITEVRQLLPCIADSSKFRVIANIAPPLGGTLKVLEPLFPRGKYSDKIGALIIQKGEIITTVYG TGKVTMTMIKSEAEARESLQSLKNTINEAIAKGVAPAPREKVRVEPMEIYKYLPQTNCGKCGEQSCYTFAIKLMGGEITL DKCTPLKEPGYATNLEHLQVLSAYI >Mature_264_residues PGNPNEIKLVNNAMSNVTRRKIMNFLSAGDKSAEEIGGEVGKTMLDFHLKLLQQASLIEIEEGTVRLSEYGRNFLKEKEE KGADKTADISQAKPIEITEVRQLLPCIADSSKFRVIANIAPPLGGTLKVLEPLFPRGKYSDKIGALIIQKGEIITTVYGT GKVTMTMIKSEAEARESLQSLKNTINEAIAKGVAPAPREKVRVEPMEIYKYLPQTNCGKCGEQSCYTFAIKLMGGEITLD KCTPLKEPGYATNLEHLQVLSAYI
Specific function: Unknown
COG id: COG4871
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29135; Mature: 29004
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGNPNEIKLVNNAMSNVTRRKIMNFLSAGDKSAEEIGGEVGKTMLDFHLKLLQQASLIE CCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE IEEGTVRLSEYGRNFLKEKEEKGADKTADISQAKPIEITEVRQLLPCIADSSKFRVIANI ECCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEC APPLGGTLKVLEPLFPRGKYSDKIGALIIQKGEIITTVYGTGKVTMTMIKSEAEARESLQ CCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEHHHHHHHHHHHHH SLKNTINEAIAKGVAPAPREKVRVEPMEIYKYLPQTNCGKCGEQSCYTFAIKLMGGEITL HHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCHHEEEEEEECCEEEE DKCTPLKEPGYATNLEHLQVLSAYI CCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure PGNPNEIKLVNNAMSNVTRRKIMNFLSAGDKSAEEIGGEVGKTMLDFHLKLLQQASLIE CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE IEEGTVRLSEYGRNFLKEKEEKGADKTADISQAKPIEITEVRQLLPCIADSSKFRVIANI ECCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEC APPLGGTLKVLEPLFPRGKYSDKIGALIIQKGEIITTVYGTGKVTMTMIKSEAEARESLQ CCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEHHHHHHHHHHHHH SLKNTINEAIAKGVAPAPREKVRVEPMEIYKYLPQTNCGKCGEQSCYTFAIKLMGGEITL HHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCHHEEEEEEECCEEEE DKCTPLKEPGYATNLEHLQVLSAYI CCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA