| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228358
Identifier: 21228358
GI number: 21228358
Start: 2683364
End: 2684062
Strand: Reverse
Name: 21228358
Synonym: MM_2256
Alternate gene names: NA
Gene position: 2684062-2683364 (Counterclockwise)
Preceding gene: 21228359
Following gene: 21228357
Centisome position: 65.52
GC content: 39.63
Gene sequence:
>699_bases GTGTCGAAATCAAAAAATGTATGGGAAGAGTTCTTTGCAGATAAGAAGAGAGGAGGGCACAGATCTTCAGCTGAAGAATT TTTATCCAAAGAGGCCAGAGAAAAGCTGTACCATCTGAATGGGGGCAAAACCCTTCTTGATTTTGGCTGCGGCGCAGGAG AGCTTCTGGTTTATTATTCTCTCGAATATGAAAAGCTCGTAGGAGCTGATTTTTCCGCATCAATGCTTGAAGAGGCAGGC AAAAGGGTCAGGGGAAGAAAGTGTGAAAATGTAAATTTAATACTGGCTAATGATAAGAATGTCTGGGAAAAGCTTGATTT TTCCTTTGACCGGATAACTGCAGCCGAAGTGATCCAGTACCTCACATATGAAAAAGTTGATAATTTTATTGCCAGTGCTA TGAAGCATTTGAACAAAGGAGGCAAAATAATTCTCTTTGACCTTCTGGACCCTCGGTTATACCCGCTATGGAAAATAGGG CTATTCTCACGAGATTTCGGAGTAGATAAAATTCTTCGTAGGATAGCTTTTGAAACGCGTACAATTTTCCTGGCGACTCT TAAAAACCGTCCAAAAGATATTCTCGGATACACTCATAAGCCCCATACAATAGAAAACATTGCAAATAAACATGGTTTCA AGATGGAGTATGTGAAGTCCATGTATTATGAGTATAAGTACCATGCAATAATATCATGA
Upstream 100 bases:
>100_bases TCAAAATCGTATGATTTATGAGGATTGACGCAACATCAGATGTAAAACTTTGATGTATGTAATAAGTGAATAAAATAGCA GTTTATGAGGTACAAAAAAC
Downstream 100 bases:
>100_bases GTGGAGATCCTGATTAATTTAAAAACCTTTTACCCTTAGTGAAGTCAGCTGATACCCTGCAATATACTGAGAACTCTATC ATTTTAAGGCTAAAAAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSKSKNVWEEFFADKKRGGHRSSAEEFLSKEAREKLYHLNGGKTLLDFGCGAGELLVYYSLEYEKLVGADFSASMLEEAG KRVRGRKCENVNLILANDKNVWEKLDFSFDRITAAEVIQYLTYEKVDNFIASAMKHLNKGGKIILFDLLDPRLYPLWKIG LFSRDFGVDKILRRIAFETRTIFLATLKNRPKDILGYTHKPHTIENIANKHGFKMEYVKSMYYEYKYHAIIS
Sequences:
>Translated_232_residues MSKSKNVWEEFFADKKRGGHRSSAEEFLSKEAREKLYHLNGGKTLLDFGCGAGELLVYYSLEYEKLVGADFSASMLEEAG KRVRGRKCENVNLILANDKNVWEKLDFSFDRITAAEVIQYLTYEKVDNFIASAMKHLNKGGKIILFDLLDPRLYPLWKIG LFSRDFGVDKILRRIAFETRTIFLATLKNRPKDILGYTHKPHTIENIANKHGFKMEYVKSMYYEYKYHAIIS >Mature_231_residues SKSKNVWEEFFADKKRGGHRSSAEEFLSKEAREKLYHLNGGKTLLDFGCGAGELLVYYSLEYEKLVGADFSASMLEEAGK RVRGRKCENVNLILANDKNVWEKLDFSFDRITAAEVIQYLTYEKVDNFIASAMKHLNKGGKIILFDLLDPRLYPLWKIGL FSRDFGVDKILRRIAFETRTIFLATLKNRPKDILGYTHKPHTIENIANKHGFKMEYVKSMYYEYKYHAIIS
Specific function: Unknown
COG id: COG2230
COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26930; Mature: 26799
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSKNVWEEFFADKKRGGHRSSAEEFLSKEAREKLYHLNGGKTLLDFGCGAGELLVYYS CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEE LEYEKLVGADFSASMLEEAGKRVRGRKCENVNLILANDKNVWEKLDFSFDRITAAEVIQY CHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHH LTYEKVDNFIASAMKHLNKGGKIILFDLLDPRLYPLWKIGLFSRDFGVDKILRRIAFETR HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHH TIFLATLKNRPKDILGYTHKPHTIENIANKHGFKMEYVKSMYYEYKYHAIIS HHEEEECCCCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEEECC >Mature Secondary Structure SKSKNVWEEFFADKKRGGHRSSAEEFLSKEAREKLYHLNGGKTLLDFGCGAGELLVYYS CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEE LEYEKLVGADFSASMLEEAGKRVRGRKCENVNLILANDKNVWEKLDFSFDRITAAEVIQY CHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHH LTYEKVDNFIASAMKHLNKGGKIILFDLLDPRLYPLWKIGLFSRDFGVDKILRRIAFETR HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHH TIFLATLKNRPKDILGYTHKPHTIENIANKHGFKMEYVKSMYYEYKYHAIIS HHEEEECCCCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA