| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228356
Identifier: 21228356
GI number: 21228356
Start: 2682145
End: 2682465
Strand: Direct
Name: 21228356
Synonym: MM_2254
Alternate gene names: NA
Gene position: 2682145-2682465 (Clockwise)
Preceding gene: 21228352
Following gene: 21228388
Centisome position: 65.48
GC content: 38.01
Gene sequence:
>321_bases TTGACTGAAATTACCGTAAATTCTACTATCTGTGATTTTGTCCATACAATCCGCGGAAGCAAAAAAGGAAGTAAAATTGT TGTTGACATCGAAACCCCATGCGAAAAGATAAAGAAATTTTCTCTTATGGAAATCCCAGTGAATGAAATTCTTGATATCA AGAATAATTACGTGATTGATAAAGCACAGGAAGCTAGGTGCTGCTCAAATTGCCTTGTGCCCTGCGCAGTACTCAACCTT TGCAAACTGGAATGTGGATTTCTTGCCAGATCTCTGGCAAAAAAAGCAGGCAGCCTAAGTATCGAATTTAATGATGTTTG A
Upstream 100 bases:
>100_bases TATATCCTAGAGACTTGAGATTACTATTCACTCTCATTAAGTTCTAAATTAAAAAGATGATAAAGAAAACTTGCAAGACT AAAAAGTAGAAGGTTATACA
Downstream 100 bases:
>100_bases AATTATCTTTCCTGCAATGGGACACATTTGTAGATATTGATTTTTTTTCAGTTCTCACAACAGTATCAGTCTTCATTTTT CGATTCTTCAGATTTTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTEITVNSTICDFVHTIRGSKKGSKIVVDIETPCEKIKKFSLMEIPVNEILDIKNNYVIDKAQEARCCSNCLVPCAVLNL CKLECGFLARSLAKKAGSLSIEFNDV
Sequences:
>Translated_106_residues MTEITVNSTICDFVHTIRGSKKGSKIVVDIETPCEKIKKFSLMEIPVNEILDIKNNYVIDKAQEARCCSNCLVPCAVLNL CKLECGFLARSLAKKAGSLSIEFNDV >Mature_105_residues TEITVNSTICDFVHTIRGSKKGSKIVVDIETPCEKIKKFSLMEIPVNEILDIKNNYVIDKAQEARCCSNCLVPCAVLNLC KLECGFLARSLAKKAGSLSIEFNDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11712; Mature: 11581
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 7.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEITVNSTICDFVHTIRGSKKGSKIVVDIETPCEKIKKFSLMEIPVNEILDIKNNYVID CCEEECCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCEECCHHHHHHCCCCEEEC KAQEARCCSNCLVPCAVLNLCKLECGFLARSLAKKAGSLSIEFNDV CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure TEITVNSTICDFVHTIRGSKKGSKIVVDIETPCEKIKKFSLMEIPVNEILDIKNNYVID CEEECCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCEECCHHHHHHCCCCEEEC KAQEARCCSNCLVPCAVLNLCKLECGFLARSLAKKAGSLSIEFNDV CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA