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The map label for this gene is ycgR [H]

Identifier: 21228347

GI number: 21228347

Start: 2672873

End: 2673772

Strand: Reverse

Name: ycgR [H]

Synonym: MM_2245

Alternate gene names: 21228347

Gene position: 2673772-2672873 (Counterclockwise)

Preceding gene: 21228348

Following gene: 21228341

Centisome position: 65.27

GC content: 45.22

Gene sequence:

>900_bases
ATGTTCTGGGATAATTTAACTGTGGCGGCTAAGTTCTTTATTGAGATCTCCGTTGAGCTAACTATTTTATTTATAGGTAT
AACTTTTCTAGTGGGGCTGAGTCAGGAGTATGTGCCGGACGAGACCATAAAAAGAGCCCTTGGTGGGCGGAATAAAGTTA
TAGGCAGTATCCTTGGGGCAGGATTTGGTGCAATTACCCCTTTCTGCTCCTGTTCAACCATACCGCTTCTCCTGGGAATG
CTTAAGGCTGGTGCACCTTTTGCTGCAGCAATGGCATTCCTATTCTCGTCGCCTTTACTAAACCCGGTGATAATATCTCT
GTTTGTCATTCTGCTGGGCTGGAAGGTAACTGCTCTTTATTTTGTCGTCGTTTTTATGTCTACAATTGCTATAGGTCTCT
TACTTGACTGGTTAGGCTTTTCCAATCAGATTAAGCCAGTTGCTGTTGTAAGAAACCGTTGTGATTGTGAGCAGGACACA
AATGCGAAGTCCAGAATACAGCGGTCTGCAGTATTCGCGTTTAGCCTTTTCCGTCAGCTTATGCCTTATCTCCTCTTGGG
AGCAGGAATTGGGGCATTTATTCACGGATTTGTACCAACAGAAGTTATCACCCGCGTTGCCGGACCGAGCAATCCTCTAG
CGGTTCCTGTTGCTGCAATTATTGGTGTCCCCATCTATATCCGGGCTGAGACTATGATTCCTATAGGACTGGCACTTATC
AAAAAAGGAATGAGTGTGGGAGCTGTTCTGGCACTGATAATAGGCGGTGCAGGAGCCAGCATACCCGAGCTGACACTTCT
GTCATCAATATTCAAGAAGAGACTGCTTACAGCCTTCGTGATAACGGTTTTTTCAATAGCTGTGATTGCAGGATATCTTG
CAAATCTGCTGACATTGTGA

Upstream 100 bases:

>100_bases
AAAAATCGCATTTATGAGAGGGTGTCTGGTGTTTTCAAGGTTCCAATAGCTGTAGCTTTCGGTAATTTAAAGGAAAAAAT
AATTTTGAAGGAAGATCAAA

Downstream 100 bases:

>100_bases
AAACCTTATAAAAGCTTAGAAACCATACCAAGCATGTAGATCAAAGACCTGGATCATTTCCCAAATATCCGGATGATCCA
GTCTTATATCTCATCTCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MFWDNLTVAAKFFIEISVELTILFIGITFLVGLSQEYVPDETIKRALGGRNKVIGSILGAGFGAITPFCSCSTIPLLLGM
LKAGAPFAAAMAFLFSSPLLNPVIISLFVILLGWKVTALYFVVVFMSTIAIGLLLDWLGFSNQIKPVAVVRNRCDCEQDT
NAKSRIQRSAVFAFSLFRQLMPYLLLGAGIGAFIHGFVPTEVITRVAGPSNPLAVPVAAIIGVPIYIRAETMIPIGLALI
KKGMSVGAVLALIIGGAGASIPELTLLSSIFKKRLLTAFVITVFSIAVIAGYLANLLTL

Sequences:

>Translated_299_residues
MFWDNLTVAAKFFIEISVELTILFIGITFLVGLSQEYVPDETIKRALGGRNKVIGSILGAGFGAITPFCSCSTIPLLLGM
LKAGAPFAAAMAFLFSSPLLNPVIISLFVILLGWKVTALYFVVVFMSTIAIGLLLDWLGFSNQIKPVAVVRNRCDCEQDT
NAKSRIQRSAVFAFSLFRQLMPYLLLGAGIGAFIHGFVPTEVITRVAGPSNPLAVPVAAIIGVPIYIRAETMIPIGLALI
KKGMSVGAVLALIIGGAGASIPELTLLSSIFKKRLLTAFVITVFSIAVIAGYLANLLTL
>Mature_299_residues
MFWDNLTVAAKFFIEISVELTILFIGITFLVGLSQEYVPDETIKRALGGRNKVIGSILGAGFGAITPFCSCSTIPLLLGM
LKAGAPFAAAMAFLFSSPLLNPVIISLFVILLGWKVTALYFVVVFMSTIAIGLLLDWLGFSNQIKPVAVVRNRCDCEQDT
NAKSRIQRSAVFAFSLFRQLMPYLLLGAGIGAFIHGFVPTEVITRVAGPSNPLAVPVAAIIGVPIYIRAETMIPIGLALI
KKGMSVGAVLALIIGGAGASIPELTLLSSIFKKRLLTAFVITVFSIAVIAGYLANLLTL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 31855; Mature: 31855

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWDNLTVAAKFFIEISVELTILFIGITFLVGLSQEYVPDETIKRALGGRNKVIGSILGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCCCHHHHHHHHHC
GFGAITPFCSCSTIPLLLGMLKAGAPFAAAMAFLFSSPLLNPVIISLFVILLGWKVTALY
CHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FVVVFMSTIAIGLLLDWLGFSNQIKPVAVVRNRCDCEQDTNAKSRIQRSAVFAFSLFRQL
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
MPYLLLGAGIGAFIHGFVPTEVITRVAGPSNPLAVPVAAIIGVPIYIRAETMIPIGLALI
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHH
KKGMSVGAVLALIIGGAGASIPELTLLSSIFKKRLLTAFVITVFSIAVIAGYLANLLTL
HCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFWDNLTVAAKFFIEISVELTILFIGITFLVGLSQEYVPDETIKRALGGRNKVIGSILGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCCCHHHHHHHHHC
GFGAITPFCSCSTIPLLLGMLKAGAPFAAAMAFLFSSPLLNPVIISLFVILLGWKVTALY
CHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FVVVFMSTIAIGLLLDWLGFSNQIKPVAVVRNRCDCEQDTNAKSRIQRSAVFAFSLFRQL
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
MPYLLLGAGIGAFIHGFVPTEVITRVAGPSNPLAVPVAAIIGVPIYIRAETMIPIGLALI
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHH
KKGMSVGAVLALIIGGAGASIPELTLLSSIFKKRLLTAFVITVFSIAVIAGYLANLLTL
HCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]