The gene/protein map for NC_008254 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228342

Identifier: 21228342

GI number: 21228342

Start: 2669541

End: 2670122

Strand: Direct

Name: 21228342

Synonym: MM_2240

Alternate gene names: NA

Gene position: 2669541-2670122 (Clockwise)

Preceding gene: 21228338

Following gene: 21228343

Centisome position: 65.17

GC content: 41.92

Gene sequence:

>582_bases
ATGAAGCGATTGCATAAAATACAGGACAGAGAACGAATTTCTTCTTCGTTTCAGTCCTTTTTGAAAAAACCGCTCCCTAT
TTTAGCTATTTTTTTTGTCCTTTTCAGCTCAGGCTGCACGGATATTAATGGTTCCGAAAGTGAAGCCGAGACTGTTGAAA
CCGCTGCTGACATTAATAATTCCGTCAGTGGAGCAGGATTGGTCGAGGTTACAGATCTGAGCCAGATTGACGAAGCTCTT
GATAAAGGTCCTGTTGTGTTGAAACTTGGTTCTAAAAGATGCATCCCCTGTCAGGAACAGGAAGAGATACTTACAGAGAT
TCTACCGATATATCAGGATAAAGCTTCAATAATGCTCATTGATGTCAATGAGTACCCTGAATTTGCATCAACATTTGGGG
TAAGAGTTATTCCAGATACCTGTGTTATTACAGTCATCGAAGACGGTAAATATATCTACATGCGGCAGGACGGAACTGAA
AGTTCGGAGAGAGCAAATGCAAGGTTCCTGGGTGTTGTCGATAAAGCAACCCTTTCAGAGACTCTTGGGAAAGCCATCGA
AGACAGAAACCATGGAGAGTAA

Upstream 100 bases:

>100_bases
TATTTATATCATATATTATACTTGAATATATCAACATATTTTGATTCTTTAATCCTTTTCTTATATGCATAAATACAGAA
CCTGATTTAGGAGAATTGTA

Downstream 100 bases:

>100_bases
TTTATGTTTTCTGACTTTCTGCCGGTCGCCGCTTTCTTTGCAGGGTTGGTCAGTGTACTCTCCCCCTGCATCCTTCCAGT
AATTCCGGCAGTTTTTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Surface Glycoprotein; Thioredoxin Domain-Containing Protein; Thiol-Disulfide Isomerase/Thioredoxin; Thioredoxin-Like Protein

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKRLHKIQDRERISSSFQSFLKKPLPILAIFFVLFSSGCTDINGSESEAETVETAADINNSVSGAGLVEVTDLSQIDEAL
DKGPVVLKLGSKRCIPCQEQEEILTEILPIYQDKASIMLIDVNEYPEFASTFGVRVIPDTCVITVIEDGKYIYMRQDGTE
SSERANARFLGVVDKATLSETLGKAIEDRNHGE

Sequences:

>Translated_193_residues
MKRLHKIQDRERISSSFQSFLKKPLPILAIFFVLFSSGCTDINGSESEAETVETAADINNSVSGAGLVEVTDLSQIDEAL
DKGPVVLKLGSKRCIPCQEQEEILTEILPIYQDKASIMLIDVNEYPEFASTFGVRVIPDTCVITVIEDGKYIYMRQDGTE
SSERANARFLGVVDKATLSETLGKAIEDRNHGE
>Mature_193_residues
MKRLHKIQDRERISSSFQSFLKKPLPILAIFFVLFSSGCTDINGSESEAETVETAADINNSVSGAGLVEVTDLSQIDEAL
DKGPVVLKLGSKRCIPCQEQEEILTEILPIYQDKASIMLIDVNEYPEFASTFGVRVIPDTCVITVIEDGKYIYMRQDGTE
SSERANARFLGVVDKATLSETLGKAIEDRNHGE

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21320; Mature: 21320

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLHKIQDRERISSSFQSFLKKPLPILAIFFVLFSSGCTDINGSESEAETVETAADINN
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
SVSGAGLVEVTDLSQIDEALDKGPVVLKLGSKRCIPCQEQEEILTEILPIYQDKASIMLI
CCCCCCEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
DVNEYPEFASTFGVRVIPDTCVITVIEDGKYIYMRQDGTESSERANARFLGVVDKATLSE
ECCCCCCHHHHCCCEEECCCEEEEEEECCCEEEEECCCCCCHHHCCCEEEEEHHHHHHHH
TLGKAIEDRNHGE
HHHHHHHCCCCCC
>Mature Secondary Structure
MKRLHKIQDRERISSSFQSFLKKPLPILAIFFVLFSSGCTDINGSESEAETVETAADINN
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
SVSGAGLVEVTDLSQIDEALDKGPVVLKLGSKRCIPCQEQEEILTEILPIYQDKASIMLI
CCCCCCEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
DVNEYPEFASTFGVRVIPDTCVITVIEDGKYIYMRQDGTESSERANARFLGVVDKATLSE
ECCCCCCHHHHCCCEEECCCEEEEEEECCCEEEEECCCCCCHHHCCCEEEEEHHHHHHHH
TLGKAIEDRNHGE
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA