| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is arsR [C]
Identifier: 21228339
GI number: 21228339
Start: 2667663
End: 2668004
Strand: Reverse
Name: arsR [C]
Synonym: MM_2237
Alternate gene names: 21228339
Gene position: 2668004-2667663 (Counterclockwise)
Preceding gene: 21228340
Following gene: 21228335
Centisome position: 65.13
GC content: 39.18
Gene sequence:
>342_bases ATGAGTTATTGCTGCCCTGTGGACCCGGAGAAAAAAAAGGAATGGGAAGAAAAAATGCTCCAGGAAATAGATTTTCTGGA CAACGACATTAAAAAAGCAAGTGAGATATTTAGTGCTCTGGGACATCCGATAAGACTGAAAATTGCTTATTTTCTTTCTC AGAGAGACCACTGTGTCTGCGAACTGATATTCAAGTTAAATGAGAGGCAAAACCTGGTCTCCCACCACCTGGCGATTTTG AAAAACTGCGGGGTCATTGAAGCCTATAATGTCTCAAAATGGAGGTTTTACAGACTGAACCCTGAATTCGGAGATATTTT GAATAATATATTGAAAATGTGA
Upstream 100 bases:
>100_bases TAGAGTTCCTGTTCAATAATATGAGGACACGACCATACGTTTAATATCAAACAAAATTGATATGAAAAAATTTATTTAGA AAGCTTAACTTCTTTTATTC
Downstream 100 bases:
>100_bases ACTGCTGCCAAGCTAAAGACTTGCCGGCTTTCCGATCATCCTTCCCTCTAACGACACCCACACAGGGCCCTACCTGCAGT CCCTGCGGTGGCAAACCCAA
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MSYCCPVDPEKKKEWEEKMLQEIDFLDNDIKKASEIFSALGHPIRLKIAYFLSQRDHCVCELIFKLNERQNLVSHHLAIL KNCGVIEAYNVSKWRFYRLNPEFGDILNNILKM
Sequences:
>Translated_113_residues MSYCCPVDPEKKKEWEEKMLQEIDFLDNDIKKASEIFSALGHPIRLKIAYFLSQRDHCVCELIFKLNERQNLVSHHLAIL KNCGVIEAYNVSKWRFYRLNPEFGDILNNILKM >Mature_112_residues SYCCPVDPEKKKEWEEKMLQEIDFLDNDIKKASEIFSALGHPIRLKIAYFLSQRDHCVCELIFKLNERQNLVSHHLAILK NCGVIEAYNVSKWRFYRLNPEFGDILNNILKM
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13390; Mature: 13259
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYCCPVDPEKKKEWEEKMLQEIDFLDNDIKKASEIFSALGHPIRLKIAYFLSQRDHCVC CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH ELIFKLNERQNLVSHHLAILKNCGVIEAYNVSKWRFYRLNPEFGDILNNILKM HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHHHHHHHCC >Mature Secondary Structure SYCCPVDPEKKKEWEEKMLQEIDFLDNDIKKASEIFSALGHPIRLKIAYFLSQRDHCVC CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH ELIFKLNERQNLVSHHLAILKNCGVIEAYNVSKWRFYRLNPEFGDILNNILKM HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA