| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228334
Identifier: 21228334
GI number: 21228334
Start: 2659152
End: 2659481
Strand: Reverse
Name: 21228334
Synonym: MM_2232
Alternate gene names: NA
Gene position: 2659481-2659152 (Counterclockwise)
Preceding gene: 21228335
Following gene: 21228333
Centisome position: 64.92
GC content: 35.45
Gene sequence:
>330_bases ATGATTAAATATACTGTGACACTTACCGGAGATGAACGTAGATCTCTTTGTGAACTTGCTTCAAAGGGAAAACATAACTC TCAACAAATTCTCAATGCTCTGATTTTGCTTAATTGCGATAAAAGTGAATTGAATGTTAGCCATTCAACCAATGAAGAAA TCTCACGTGTCCTGAATATTAGTATGAAAAAAATTGACCGTGTTAAGAAGAGATTTGTTGAAGAAGGTCTTGAAGTTGCC CTTAACGGGAAAGAAAGCGAGCGCATTTATACTAAAAAAGTTGATGGTGATCTTGAAGCCCATTTAGAGCCTATCCGAAA AGTAGAATAA
Upstream 100 bases:
>100_bases AAAACCTTCTTTCGGGCCTAGCTTTAGGAAAAACACTAGTGTCGTGTCACCGATGGGAAGTCTTAAGCGTTATATTGAAT GATCTTCATAAGTATCATTC
Downstream 100 bases:
>100_bases CTGCGATATTGTGTAATGTTTATTAGTGACACGACGAAAAAACGGGCACGACTACGAGATTTCTGATAAATTGTGGAATA AAATCAAACCTCTACTCCCA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MIKYTVTLTGDERRSLCELASKGKHNSQQILNALILLNCDKSELNVSHSTNEEISRVLNISMKKIDRVKKRFVEEGLEVA LNGKESERIYTKKVDGDLEAHLEPIRKVE
Sequences:
>Translated_109_residues MIKYTVTLTGDERRSLCELASKGKHNSQQILNALILLNCDKSELNVSHSTNEEISRVLNISMKKIDRVKKRFVEEGLEVA LNGKESERIYTKKVDGDLEAHLEPIRKVE >Mature_109_residues MIKYTVTLTGDERRSLCELASKGKHNSQQILNALILLNCDKSELNVSHSTNEEISRVLNISMKKIDRVKKRFVEEGLEVA LNGKESERIYTKKVDGDLEAHLEPIRKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12437; Mature: 12437
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKYTVTLTGDERRSLCELASKGKHNSQQILNALILLNCDKSELNVSHSTNEEISRVLNI CEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHH SMKKIDRVKKRFVEEGLEVALNGKESERIYTKKVDGDLEAHLEPIRKVE HHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure MIKYTVTLTGDERRSLCELASKGKHNSQQILNALILLNCDKSELNVSHSTNEEISRVLNI CEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHH SMKKIDRVKKRFVEEGLEVALNGKESERIYTKKVDGDLEAHLEPIRKVE HHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA