The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228333

Identifier: 21228333

GI number: 21228333

Start: 2658305

End: 2658997

Strand: Reverse

Name: 21228333

Synonym: MM_2231

Alternate gene names: NA

Gene position: 2658997-2658305 (Counterclockwise)

Preceding gene: 21228334

Following gene: 21228332

Centisome position: 64.91

GC content: 38.53

Gene sequence:

>693_bases
ATGAGTGGTATTTTTTATGTACTCCTTACAGGTTGCCAATGGAAATTATTGCCACGATTTTATGGAGCCCCAAGTACCGT
ACATGATCGATTTCAGGAATGGCGAAAATCAAGCTTATTTGAGAAAATGTGGAAAGCTGGTTTATTGGATTATGACAAAA
ATAAAGGATTAGAATGGGAATGGCAAGCAATTGATGGGGCCATGACAAAAGCACCATTGGGTGGAGCTGGAACAGGAGCT
AATCCTACTGACCGTGGTAAAAAAGGTACAAAAAGGAGTCTGTTAACAGATGGTAAAGGTATACCACTTTCGGTAACTGT
AGATGGAGCTAATCGTCACGATAAAAAGCTTGTAAAAGGAACTCTTGATGCCATTATTTTTCAAAGACCTTCTCTAGATG
AGGGAATTCAGAATATCTGTATGGATAAGGGATATGATTTTCCTGATATCAGAGAATTGGTTAAAGAATATGGATATATA
GCACATATAAGAAGAAGGGGAGAAGAAAACATAAGAAAAAAAGAGATACCAGGTTACAGAGCAAGAAGGTGGGTTGTGGA
AAGGACACATTCCTGGCTCAATAGATTCAGAAGGCTGCTTATTAGATGGGAAAAAAAGATTGAGAATTACTATGCGATGC
TTCAGTTAGCATGTGCATGCATAACATTTAGAGCAGCGGGACTTTTCGGATAG

Upstream 100 bases:

>100_bases
CGAGATTTCTGATAAATTGTGGAATAAAATCAAACCTCTACTCCCACTCCCTAAACCGAAAAAGAAGCCTGGAAGACCTA
GAAAGGATGATAGGAAAATA

Downstream 100 bases:

>100_bases
GCACTTAGTCGCCCTTAGTTGCAGTCAACCCCCTGAAGGTTTTGCAAGATGGTCGTTAAGATTATTAGCCGATAAGGCTG
TAGAACTTGGTTATTTCGAG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSGIFYVLLTGCQWKLLPRFYGAPSTVHDRFQEWRKSSLFEKMWKAGLLDYDKNKGLEWEWQAIDGAMTKAPLGGAGTGA
NPTDRGKKGTKRSLLTDGKGIPLSVTVDGANRHDKKLVKGTLDAIIFQRPSLDEGIQNICMDKGYDFPDIRELVKEYGYI
AHIRRRGEENIRKKEIPGYRARRWVVERTHSWLNRFRRLLIRWEKKIENYYAMLQLACACITFRAAGLFG

Sequences:

>Translated_230_residues
MSGIFYVLLTGCQWKLLPRFYGAPSTVHDRFQEWRKSSLFEKMWKAGLLDYDKNKGLEWEWQAIDGAMTKAPLGGAGTGA
NPTDRGKKGTKRSLLTDGKGIPLSVTVDGANRHDKKLVKGTLDAIIFQRPSLDEGIQNICMDKGYDFPDIRELVKEYGYI
AHIRRRGEENIRKKEIPGYRARRWVVERTHSWLNRFRRLLIRWEKKIENYYAMLQLACACITFRAAGLFG
>Mature_229_residues
SGIFYVLLTGCQWKLLPRFYGAPSTVHDRFQEWRKSSLFEKMWKAGLLDYDKNKGLEWEWQAIDGAMTKAPLGGAGTGAN
PTDRGKKGTKRSLLTDGKGIPLSVTVDGANRHDKKLVKGTLDAIIFQRPSLDEGIQNICMDKGYDFPDIRELVKEYGYIA
HIRRRGEENIRKKEIPGYRARRWVVERTHSWLNRFRRLLIRWEKKIENYYAMLQLACACITFRAAGLFG

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 26519; Mature: 26388

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIFYVLLTGCQWKLLPRFYGAPSTVHDRFQEWRKSSLFEKMWKAGLLDYDKNKGLEWE
CCCEEEEEECCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
WQAIDGAMTKAPLGGAGTGANPTDRGKKGTKRSLLTDGKGIPLSVTVDGANRHDKKLVKG
EHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHH
TLDAIIFQRPSLDEGIQNICMDKGYDFPDIRELVKEYGYIAHIRRRGEENIRKKEIPGYR
HHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHH
ARRWVVERTHSWLNRFRRLLIRWEKKIENYYAMLQLACACITFRAAGLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGIFYVLLTGCQWKLLPRFYGAPSTVHDRFQEWRKSSLFEKMWKAGLLDYDKNKGLEWE
CCEEEEEECCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
WQAIDGAMTKAPLGGAGTGANPTDRGKKGTKRSLLTDGKGIPLSVTVDGANRHDKKLVKG
EHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHH
TLDAIIFQRPSLDEGIQNICMDKGYDFPDIRELVKEYGYIAHIRRRGEENIRKKEIPGYR
HHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHH
ARRWVVERTHSWLNRFRRLLIRWEKKIENYYAMLQLACACITFRAAGLFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1650732 [H]