| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228331
Identifier: 21228331
GI number: 21228331
Start: 2656499
End: 2657440
Strand: Direct
Name: 21228331
Synonym: MM_2229
Alternate gene names: NA
Gene position: 2656499-2657440 (Clockwise)
Preceding gene: 21228328
Following gene: 21228336
Centisome position: 64.85
GC content: 47.56
Gene sequence:
>942_bases ATGCTTAAAACACGCCTCAGAGATTTTCTTCTTACAAAAGACGACTGGCTTTTTGCAGTTTCTGATTATTTCCGTACCGA TGGGATAAGAGCCACGCTTCGCTACGTTCCGGATGAAACCGGAGAGAGGGAATTAAACGGAGTAAGGTACAAAAAATATG ATTTCGGTCCTGCTTTCGAATTCATGAAAAAAAATAGGCCAGAATGGGTCCGGGACGTGCACGTTGTCCCTGAATCCGAA GTAAAAAAAGTGCTCCGCCCTTCTGATGTAATTCCCGAGCTTGTAAATTCCGACAGCCGTGTAAGGGCAATAGTAAAGGT GCTTGACATGGCGGAAATTCCCAGGACAAGTATGGGAGTTACGGGTTCAATGCTTGCAGGCCTGCAGAATGAGAGTTCAG ATGTCGATTTTGTTGTCTACGGCCCCATGTGGTTCAGGGCAAGAGATGCCATAGCCGCTGCTAAACAGCAGGAGGGGCCT GTGGAGGAACTGGATGAGGATATGTGGCAGAGGATCTACAGAAAAAGAATCCCTGAGATCTCTTTTGACGAATTCATGCT GCATGAGTCCAGAAAAGGCAACCGCGGTATGGTTGAGGGCACGTACTTTGACCTCCTTTTCGTGCGGGAATGGGACCAGA TTAAAGAGCCCCTGCTTCGCGGAAAAGATACCGTCAAAATGAAAATTGAAGCCGAAGTTATAAATGCTGACTTTGCCTTT GACAGCCCTTCCTATTATAAAGTGGAACACGAAGAAATCGACCATGTGCTTTCCTACACTCATACATACGCAGGCCAGGC TCTCCCCGGAGAGATCATAGAAGCCCGCGGAGTGGTCGAAGAAGTCGGGAACATTAAGCGGCTTGTTGTGGGTACTTCAA GGGAGCCTAAAGGGGAATGGATAAGGTCTCTTACCTGGCTTGAAAAGTGCGGATATAAGTGA
Upstream 100 bases:
>100_bases CAGGTCCATTCTTTATGGGAAATTCTTGACTGAAAAACCAATCCGTAGCAGTTAAGTTCGGCAGACTGGATTATTTTTCA GGCTCCAGGGATGATACAAA
Downstream 100 bases:
>100_bases AAAAAATTAACTGTAACTCACTAGTGTCGCGTCAATCCTCAATAGTCGGATAAAGACGTGACAATTTTATCCTTGCATCA TCTGTTGTAAATTGCCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLKTRLRDFLLTKDDWLFAVSDYFRTDGIRATLRYVPDETGERELNGVRYKKYDFGPAFEFMKKNRPEWVRDVHVVPESE VKKVLRPSDVIPELVNSDSRVRAIVKVLDMAEIPRTSMGVTGSMLAGLQNESSDVDFVVYGPMWFRARDAIAAAKQQEGP VEELDEDMWQRIYRKRIPEISFDEFMLHESRKGNRGMVEGTYFDLLFVREWDQIKEPLLRGKDTVKMKIEAEVINADFAF DSPSYYKVEHEEIDHVLSYTHTYAGQALPGEIIEARGVVEEVGNIKRLVVGTSREPKGEWIRSLTWLEKCGYK
Sequences:
>Translated_313_residues MLKTRLRDFLLTKDDWLFAVSDYFRTDGIRATLRYVPDETGERELNGVRYKKYDFGPAFEFMKKNRPEWVRDVHVVPESE VKKVLRPSDVIPELVNSDSRVRAIVKVLDMAEIPRTSMGVTGSMLAGLQNESSDVDFVVYGPMWFRARDAIAAAKQQEGP VEELDEDMWQRIYRKRIPEISFDEFMLHESRKGNRGMVEGTYFDLLFVREWDQIKEPLLRGKDTVKMKIEAEVINADFAF DSPSYYKVEHEEIDHVLSYTHTYAGQALPGEIIEARGVVEEVGNIKRLVVGTSREPKGEWIRSLTWLEKCGYK >Mature_313_residues MLKTRLRDFLLTKDDWLFAVSDYFRTDGIRATLRYVPDETGERELNGVRYKKYDFGPAFEFMKKNRPEWVRDVHVVPESE VKKVLRPSDVIPELVNSDSRVRAIVKVLDMAEIPRTSMGVTGSMLAGLQNESSDVDFVVYGPMWFRARDAIAAAKQQEGP VEELDEDMWQRIYRKRIPEISFDEFMLHESRKGNRGMVEGTYFDLLFVREWDQIKEPLLRGKDTVKMKIEAEVINADFAF DSPSYYKVEHEEIDHVLSYTHTYAGQALPGEIIEARGVVEEVGNIKRLVVGTSREPKGEWIRSLTWLEKCGYK
Specific function: Unknown
COG id: COG1665
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002934 [H]
Pfam domain/function: PF01909 NTP_transf_2 [H]
EC number: NA
Molecular weight: Translated: 36344; Mature: 36344
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTRLRDFLLTKDDWLFAVSDYFRTDGIRATLRYVPDETGERELNGVRYKKYDFGPAFE CCHHHHHHHHCCCCCEEEEHHHHHHCCCCEEEEEECCCCCCCHHHCCCEEEECCCCHHHH FMKKNRPEWVRDVHVVPESEVKKVLRPSDVIPELVNSDSRVRAIVKVLDMAEIPRTSMGV HHHCCCCCHHHHEECCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC TGSMLAGLQNESSDVDFVVYGPMWFRARDAIAAAKQQEGPVEELDEDMWQRIYRKRIPEI CHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC SFDEFMLHESRKGNRGMVEGTYFDLLFVREWDQIKEPLLRGKDTVKMKIEAEVINADFAF CHHHHHHHHCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHCCCCEEEEEEEEEEEECEECC DSPSYYKVEHEEIDHVLSYTHTYAGQALPGEIIEARGVVEEVGNIKRLVVGTSREPKGEW CCCCEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH IRSLTWLEKCGYK HHHHHHHHHCCCC >Mature Secondary Structure MLKTRLRDFLLTKDDWLFAVSDYFRTDGIRATLRYVPDETGERELNGVRYKKYDFGPAFE CCHHHHHHHHCCCCCEEEEHHHHHHCCCCEEEEEECCCCCCCHHHCCCEEEECCCCHHHH FMKKNRPEWVRDVHVVPESEVKKVLRPSDVIPELVNSDSRVRAIVKVLDMAEIPRTSMGV HHHCCCCCHHHHEECCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC TGSMLAGLQNESSDVDFVVYGPMWFRARDAIAAAKQQEGPVEELDEDMWQRIYRKRIPEI CHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC SFDEFMLHESRKGNRGMVEGTYFDLLFVREWDQIKEPLLRGKDTVKMKIEAEVINADFAF CHHHHHHHHCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHCCCCEEEEEEEEEEEECEECC DSPSYYKVEHEEIDHVLSYTHTYAGQALPGEIIEARGVVEEVGNIKRLVVGTSREPKGEW CCCCEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH IRSLTWLEKCGYK HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]