Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228331

Identifier: 21228331

GI number: 21228331

Start: 2656499

End: 2657440

Strand: Direct

Name: 21228331

Synonym: MM_2229

Alternate gene names: NA

Gene position: 2656499-2657440 (Clockwise)

Preceding gene: 21228328

Following gene: 21228336

Centisome position: 64.85

GC content: 47.56

Gene sequence:

>942_bases
ATGCTTAAAACACGCCTCAGAGATTTTCTTCTTACAAAAGACGACTGGCTTTTTGCAGTTTCTGATTATTTCCGTACCGA
TGGGATAAGAGCCACGCTTCGCTACGTTCCGGATGAAACCGGAGAGAGGGAATTAAACGGAGTAAGGTACAAAAAATATG
ATTTCGGTCCTGCTTTCGAATTCATGAAAAAAAATAGGCCAGAATGGGTCCGGGACGTGCACGTTGTCCCTGAATCCGAA
GTAAAAAAAGTGCTCCGCCCTTCTGATGTAATTCCCGAGCTTGTAAATTCCGACAGCCGTGTAAGGGCAATAGTAAAGGT
GCTTGACATGGCGGAAATTCCCAGGACAAGTATGGGAGTTACGGGTTCAATGCTTGCAGGCCTGCAGAATGAGAGTTCAG
ATGTCGATTTTGTTGTCTACGGCCCCATGTGGTTCAGGGCAAGAGATGCCATAGCCGCTGCTAAACAGCAGGAGGGGCCT
GTGGAGGAACTGGATGAGGATATGTGGCAGAGGATCTACAGAAAAAGAATCCCTGAGATCTCTTTTGACGAATTCATGCT
GCATGAGTCCAGAAAAGGCAACCGCGGTATGGTTGAGGGCACGTACTTTGACCTCCTTTTCGTGCGGGAATGGGACCAGA
TTAAAGAGCCCCTGCTTCGCGGAAAAGATACCGTCAAAATGAAAATTGAAGCCGAAGTTATAAATGCTGACTTTGCCTTT
GACAGCCCTTCCTATTATAAAGTGGAACACGAAGAAATCGACCATGTGCTTTCCTACACTCATACATACGCAGGCCAGGC
TCTCCCCGGAGAGATCATAGAAGCCCGCGGAGTGGTCGAAGAAGTCGGGAACATTAAGCGGCTTGTTGTGGGTACTTCAA
GGGAGCCTAAAGGGGAATGGATAAGGTCTCTTACCTGGCTTGAAAAGTGCGGATATAAGTGA

Upstream 100 bases:

>100_bases
CAGGTCCATTCTTTATGGGAAATTCTTGACTGAAAAACCAATCCGTAGCAGTTAAGTTCGGCAGACTGGATTATTTTTCA
GGCTCCAGGGATGATACAAA

Downstream 100 bases:

>100_bases
AAAAAATTAACTGTAACTCACTAGTGTCGCGTCAATCCTCAATAGTCGGATAAAGACGTGACAATTTTATCCTTGCATCA
TCTGTTGTAAATTGCCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLKTRLRDFLLTKDDWLFAVSDYFRTDGIRATLRYVPDETGERELNGVRYKKYDFGPAFEFMKKNRPEWVRDVHVVPESE
VKKVLRPSDVIPELVNSDSRVRAIVKVLDMAEIPRTSMGVTGSMLAGLQNESSDVDFVVYGPMWFRARDAIAAAKQQEGP
VEELDEDMWQRIYRKRIPEISFDEFMLHESRKGNRGMVEGTYFDLLFVREWDQIKEPLLRGKDTVKMKIEAEVINADFAF
DSPSYYKVEHEEIDHVLSYTHTYAGQALPGEIIEARGVVEEVGNIKRLVVGTSREPKGEWIRSLTWLEKCGYK

Sequences:

>Translated_313_residues
MLKTRLRDFLLTKDDWLFAVSDYFRTDGIRATLRYVPDETGERELNGVRYKKYDFGPAFEFMKKNRPEWVRDVHVVPESE
VKKVLRPSDVIPELVNSDSRVRAIVKVLDMAEIPRTSMGVTGSMLAGLQNESSDVDFVVYGPMWFRARDAIAAAKQQEGP
VEELDEDMWQRIYRKRIPEISFDEFMLHESRKGNRGMVEGTYFDLLFVREWDQIKEPLLRGKDTVKMKIEAEVINADFAF
DSPSYYKVEHEEIDHVLSYTHTYAGQALPGEIIEARGVVEEVGNIKRLVVGTSREPKGEWIRSLTWLEKCGYK
>Mature_313_residues
MLKTRLRDFLLTKDDWLFAVSDYFRTDGIRATLRYVPDETGERELNGVRYKKYDFGPAFEFMKKNRPEWVRDVHVVPESE
VKKVLRPSDVIPELVNSDSRVRAIVKVLDMAEIPRTSMGVTGSMLAGLQNESSDVDFVVYGPMWFRARDAIAAAKQQEGP
VEELDEDMWQRIYRKRIPEISFDEFMLHESRKGNRGMVEGTYFDLLFVREWDQIKEPLLRGKDTVKMKIEAEVINADFAF
DSPSYYKVEHEEIDHVLSYTHTYAGQALPGEIIEARGVVEEVGNIKRLVVGTSREPKGEWIRSLTWLEKCGYK

Specific function: Unknown

COG id: COG1665

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002934 [H]

Pfam domain/function: PF01909 NTP_transf_2 [H]

EC number: NA

Molecular weight: Translated: 36344; Mature: 36344

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTRLRDFLLTKDDWLFAVSDYFRTDGIRATLRYVPDETGERELNGVRYKKYDFGPAFE
CCHHHHHHHHCCCCCEEEEHHHHHHCCCCEEEEEECCCCCCCHHHCCCEEEECCCCHHHH
FMKKNRPEWVRDVHVVPESEVKKVLRPSDVIPELVNSDSRVRAIVKVLDMAEIPRTSMGV
HHHCCCCCHHHHEECCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
TGSMLAGLQNESSDVDFVVYGPMWFRARDAIAAAKQQEGPVEELDEDMWQRIYRKRIPEI
CHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
SFDEFMLHESRKGNRGMVEGTYFDLLFVREWDQIKEPLLRGKDTVKMKIEAEVINADFAF
CHHHHHHHHCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHCCCCEEEEEEEEEEEECEECC
DSPSYYKVEHEEIDHVLSYTHTYAGQALPGEIIEARGVVEEVGNIKRLVVGTSREPKGEW
CCCCEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH
IRSLTWLEKCGYK
HHHHHHHHHCCCC
>Mature Secondary Structure
MLKTRLRDFLLTKDDWLFAVSDYFRTDGIRATLRYVPDETGERELNGVRYKKYDFGPAFE
CCHHHHHHHHCCCCCEEEEHHHHHHCCCCEEEEEECCCCCCCHHHCCCEEEECCCCHHHH
FMKKNRPEWVRDVHVVPESEVKKVLRPSDVIPELVNSDSRVRAIVKVLDMAEIPRTSMGV
HHHCCCCCHHHHEECCCHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
TGSMLAGLQNESSDVDFVVYGPMWFRARDAIAAAKQQEGPVEELDEDMWQRIYRKRIPEI
CHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
SFDEFMLHESRKGNRGMVEGTYFDLLFVREWDQIKEPLLRGKDTVKMKIEAEVINADFAF
CHHHHHHHHCCCCCCCCCCCHHEEEEHHHHHHHHHHHHHCCCCEEEEEEEEEEEECEECC
DSPSYYKVEHEEIDHVLSYTHTYAGQALPGEIIEARGVVEEVGNIKRLVVGTSREPKGEW
CCCCEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH
IRSLTWLEKCGYK
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]