| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228290
Identifier: 21228290
GI number: 21228290
Start: 2596377
End: 2596976
Strand: Direct
Name: 21228290
Synonym: MM_2188
Alternate gene names: NA
Gene position: 2596377-2596976 (Clockwise)
Preceding gene: 21228289
Following gene: 21228293
Centisome position: 63.38
GC content: 39.33
Gene sequence:
>600_bases ATGAATTCAAGGGTCATTATATGTTCTATATTTATTCTTTTAATGTTAATGGGGGTTGTATCTGCCACTAGCCAATATGG TTCGATTGATGTTTATTACAATGATGAGATATTACCTGGTAAAGAGGTTGCAAAACCAACACTCAAAATTGGAGAACCCT TCAAAGTAAGAATTGAAATGACACTTAATCAGACTAGCACTGTGTTTGTGCAAGTTTGTAGTTTAGGAGGTAATTTCTTT GAAGTCAAAGAAGGTCCGTCAGAATTTGGAAAAACATTTTATATAAAGTCTTTAGACCCTGGAAAGCATGTTTTTGAATG GACACTCGTTCCTACGGATGAGTGGGCTGGGGGGTCGATTCCAATAAATTTCTGGTATCAGATCAACCTTATAGAAGAAG ATGAACCTGCTGTAAAAGGAGAATTTACAGTCGCTTACTGCACGATTTCCAACGAACATTACGAAGGCAAAATTCACACT TCTGAAGAGCAGCCAGTTTCAGAAACCGAATCCTCCCCCACATCAGCATCTACTCCAGCCTTTACACTTGTCGGCGCGCT TTCAGTTATTGCATTGGTTTTTGCCCTGTTCCGCAGGTAA
Upstream 100 bases:
>100_bases AATTGTTGGTCCTAGTCCTAAAGGTGTAGGAGATAAAATAGAAGGTAGTACAGAAGAGTCTGCAGGTTATAAAGATCTAT ACAATGAATGGTGATTAACT
Downstream 100 bases:
>100_bases AATGCTTGCGGAAGGATTTATTTAGCTATCCCTTAATCCGTTTTAAAAGTCAGGACCAAAAAAGTAATTTTAAGTTAGGA GAGGTTCGTCTTTCGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MNSRVIICSIFILLMLMGVVSATSQYGSIDVYYNDEILPGKEVAKPTLKIGEPFKVRIEMTLNQTSTVFVQVCSLGGNFF EVKEGPSEFGKTFYIKSLDPGKHVFEWTLVPTDEWAGGSIPINFWYQINLIEEDEPAVKGEFTVAYCTISNEHYEGKIHT SEEQPVSETESSPTSASTPAFTLVGALSVIALVFALFRR
Sequences:
>Translated_199_residues MNSRVIICSIFILLMLMGVVSATSQYGSIDVYYNDEILPGKEVAKPTLKIGEPFKVRIEMTLNQTSTVFVQVCSLGGNFF EVKEGPSEFGKTFYIKSLDPGKHVFEWTLVPTDEWAGGSIPINFWYQINLIEEDEPAVKGEFTVAYCTISNEHYEGKIHT SEEQPVSETESSPTSASTPAFTLVGALSVIALVFALFRR >Mature_199_residues MNSRVIICSIFILLMLMGVVSATSQYGSIDVYYNDEILPGKEVAKPTLKIGEPFKVRIEMTLNQTSTVFVQVCSLGGNFF EVKEGPSEFGKTFYIKSLDPGKHVFEWTLVPTDEWAGGSIPINFWYQINLIEEDEPAVKGEFTVAYCTISNEHYEGKIHT SEEQPVSETESSPTSASTPAFTLVGALSVIALVFALFRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22093; Mature: 22093
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRVIICSIFILLMLMGVVSATSQYGSIDVYYNDEILPGKEVAKPTLKIGEPFKVRIEM CCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCEECCCCEEEEEEE TLNQTSTVFVQVCSLGGNFFEVKEGPSEFGKTFYIKSLDPGKHVFEWTLVPTDEWAGGSI EECCCCEEEEEHHHCCCCEEEECCCHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCE PINFWYQINLIEEDEPAVKGEFTVAYCTISNEHYEGKIHTSEEQPVSETESSPTSASTPA EEEEEEEEEEEECCCCCCCCEEEEEEEEECCCEECCEEECCCCCCCCCCCCCCCCCCCCH FTLVGALSVIALVFALFRR HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSRVIICSIFILLMLMGVVSATSQYGSIDVYYNDEILPGKEVAKPTLKIGEPFKVRIEM CCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCEECCCCEEEEEEE TLNQTSTVFVQVCSLGGNFFEVKEGPSEFGKTFYIKSLDPGKHVFEWTLVPTDEWAGGSI EECCCCEEEEEHHHCCCCEEEECCCHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCCCE PINFWYQINLIEEDEPAVKGEFTVAYCTISNEHYEGKIHTSEEQPVSETESSPTSASTPA EEEEEEEEEEEECCCCCCCCEEEEEEEEECCCEECCEEECCCCCCCCCCCCCCCCCCCCH FTLVGALSVIALVFALFRR HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA