Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21228288

Identifier: 21228288

GI number: 21228288

Start: 2594906

End: 2595514

Strand: Direct

Name: 21228288

Synonym: MM_2186

Alternate gene names: NA

Gene position: 2594906-2595514 (Clockwise)

Preceding gene: 21228287

Following gene: 21228289

Centisome position: 63.35

GC content: 33.0

Gene sequence:

>609_bases
ATGAGAAGGAAAATAGTACTAATGGGGGTAATTTTAATTTTATTTACAAGTACAGCATCCGCATATAATCCTTATGGAGA
TGTTTATGAGTATAACCTATATTTTAATGGTAAATTGCTAAACACTACGGAAGTTCCAAAACCAGTTTTAAAGATCGGAG
AACCTTTTGATGTTAAAATTGATTTTGCAATCTATAAAAAATGCGAAATGTCTATAAAACTAAGTGAAATAGAAAAAGGT
TATTTTGTAATACTTAATGGTTCAACTCCTAAAATGGATGTATATAGAGCTGATGTAGTAGAAAAAAATTCTACTATTAC
TTATGAGTGGACAGTTAAACCTACTGAAAAATGGAAGGGAGGATCTTTGCCAATTGATCTTGTTTATCAAATTGATGATT
TTGAAACAAAAAATTCGCTTGTTCATGGTTCATTTACCATAGCATATCCGTATATTTCCAACGAGCATTATGAAGGCAAA
ATTCCCACTTCCGAAGAATCATCAGTTTCAGAAACGGAATCCTTACCTACATCAGCATCCACTCCAGCCTTTACACTTGC
CAGCGCAATTTCAGTTCTAGCATTGGCTTTTGCTATTTTCCGGAGATGA

Upstream 100 bases:

>100_bases
TAGTTGGACCTGGACCAAAAGGAGTTGGAGATAAAACTGGAGATGGGACTGAAAAATCGGTAATGTACGATGATCTTTTG
ACAGAGTTTGGAGGATAATT

Downstream 100 bases:

>100_bases
AAACCTCGATTTGGAGATCTATTTTTAAATGTCTTCAAACCTTTTTTTCATCTGTAAAAATCTTCAGGGCTGTTTAATGA
GGCTTCAGATTATTGAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRRKIVLMGVILILFTSTASAYNPYGDVYEYNLYFNGKLLNTTEVPKPVLKIGEPFDVKIDFAIYKKCEMSIKLSEIEKG
YFVILNGSTPKMDVYRADVVEKNSTITYEWTVKPTEKWKGGSLPIDLVYQIDDFETKNSLVHGSFTIAYPYISNEHYEGK
IPTSEESSVSETESLPTSASTPAFTLASAISVLALAFAIFRR

Sequences:

>Translated_202_residues
MRRKIVLMGVILILFTSTASAYNPYGDVYEYNLYFNGKLLNTTEVPKPVLKIGEPFDVKIDFAIYKKCEMSIKLSEIEKG
YFVILNGSTPKMDVYRADVVEKNSTITYEWTVKPTEKWKGGSLPIDLVYQIDDFETKNSLVHGSFTIAYPYISNEHYEGK
IPTSEESSVSETESLPTSASTPAFTLASAISVLALAFAIFRR
>Mature_202_residues
MRRKIVLMGVILILFTSTASAYNPYGDVYEYNLYFNGKLLNTTEVPKPVLKIGEPFDVKIDFAIYKKCEMSIKLSEIEKG
YFVILNGSTPKMDVYRADVVEKNSTITYEWTVKPTEKWKGGSLPIDLVYQIDDFETKNSLVHGSFTIAYPYISNEHYEGK
IPTSEESSVSETESLPTSASTPAFTLASAISVLALAFAIFRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22730; Mature: 22730

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKIVLMGVILILFTSTASAYNPYGDVYEYNLYFNGKLLNTTEVPKPVLKIGEPFDVKI
CCCEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCEEECCCCCCHHHHHCCCCCEEEE
DFAIYKKCEMSIKLSEIEKGYFVILNGSTPKMDVYRADVVEKNSTITYEWTVKPTEKWKG
EEEEEEEEEEEEEEEECCCCEEEEECCCCCCEEEEEECEEECCCEEEEEEEECCCCCCCC
GSLPIDLVYQIDDFETKNSLVHGSFTIAYPYISNEHYEGKIPTSEESSVSETESLPTSAS
CCCCEEEEEEECCCCCCCCEEECEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCC
TPAFTLASAISVLALAFAIFRR
CCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRKIVLMGVILILFTSTASAYNPYGDVYEYNLYFNGKLLNTTEVPKPVLKIGEPFDVKI
CCCEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCEEECCCCCCHHHHHCCCCCEEEE
DFAIYKKCEMSIKLSEIEKGYFVILNGSTPKMDVYRADVVEKNSTITYEWTVKPTEKWKG
EEEEEEEEEEEEEEEECCCCEEEEECCCCCCEEEEEECEEECCCEEEEEEEECCCCCCCC
GSLPIDLVYQIDDFETKNSLVHGSFTIAYPYISNEHYEGKIPTSEESSVSETESLPTSAS
CCCCEEEEEEECCCCCCCCEEECEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCC
TPAFTLASAISVLALAFAIFRR
CCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA