| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228275
Identifier: 21228275
GI number: 21228275
Start: 2576273
End: 2576554
Strand: Direct
Name: 21228275
Synonym: MM_2173
Alternate gene names: NA
Gene position: 2576273-2576554 (Clockwise)
Preceding gene: 21228274
Following gene: 21228277
Centisome position: 62.89
GC content: 43.97
Gene sequence:
>282_bases ATGCATCTGGGCAATCGCAGGATGACGCTTCACCCGGACGTTCTTGCTGTGAAGCCTGAAAAGGAATTACGCTGGTCAGG GCATCTTTATGTCCCCGGGATATTTGACGGCGAACACTGCTTTATCATTGAGCCTCTGAATGAAAATCAGGTTCTTTTTA TTCAGCACGAGAAATTTAACGGGTTACTGGTTCCTTTTTTTACCTCAATACTTGCAGTTACCAGGAACAGTTTTGAAGAG ATGAACCGGGCGCTTAAAGAACGTTCTGAAAAGGAAAAGTAA
Upstream 100 bases:
>100_bases ATGGGAGGTACTTATTGATTTTGAGGCATATCAGCAGTGGAATCCATTTATTCGTAAGATCGACGGGGTTGTCAAACCGG GCAACAGGATTTCAGCTCAA
Downstream 100 bases:
>100_bases AAAAGGAAAGGGTTTTTTCTACCTTTCAGGGATTATCAGAATCTCCTGGAACCCAGTTGCTGTAGAGTTTCCACTCGATT AGAGAATCTTTACTATCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Activator Of; ThiolDisulfide Interchange Domain Protein; Cyclase/Dehydrase
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MHLGNRRMTLHPDVLAVKPEKELRWSGHLYVPGIFDGEHCFIIEPLNENQVLFIQHEKFNGLLVPFFTSILAVTRNSFEE MNRALKERSEKEK
Sequences:
>Translated_93_residues MHLGNRRMTLHPDVLAVKPEKELRWSGHLYVPGIFDGEHCFIIEPLNENQVLFIQHEKFNGLLVPFFTSILAVTRNSFEE MNRALKERSEKEK >Mature_93_residues MHLGNRRMTLHPDVLAVKPEKELRWSGHLYVPGIFDGEHCFIIEPLNENQVLFIQHEKFNGLLVPFFTSILAVTRNSFEE MNRALKERSEKEK
Specific function: Unknown
COG id: COG4891
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10919; Mature: 10919
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLGNRRMTLHPDVLAVKPEKELRWSGHLYVPGIFDGEHCFIIEPLNENQVLFIQHEKFN CCCCCCCEEECCCEEEECCCHHCEECCCEEECCEECCCEEEEEEECCCCCEEEEEECCCC GLLVPFFTSILAVTRNSFEEMNRALKERSEKEK CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHLGNRRMTLHPDVLAVKPEKELRWSGHLYVPGIFDGEHCFIIEPLNENQVLFIQHEKFN CCCCCCCEEECCCEEEECCCHHCEECCCEEECCEECCCEEEEEEECCCCCEEEEEECCCC GLLVPFFTSILAVTRNSFEEMNRALKERSEKEK CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA