Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228268

Identifier: 21228268

GI number: 21228268

Start: 2568410

End: 2568724

Strand: Direct

Name: 21228268

Synonym: MM_2166

Alternate gene names: NA

Gene position: 2568410-2568724 (Clockwise)

Preceding gene: 21228267

Following gene: 21228269

Centisome position: 62.7

GC content: 29.52

Gene sequence:

>315_bases
TTGCTGAAATCAAAAAAAAGACTCTTAAATCCTGACTATTTATTTGTCACTCAGGATGAGAGTAGTTTTTATTTAGACTC
AAACAGATCAAAATGTTGGGCAATAAAAGGCTCTAAGCCTATTAAATTTATAAGTGGTTCAAAAACAAAAATCAATATTG
GAGGATTCTACACTGAAAACAGAGACTTTTATTGGTATGATTTAGGGATTAAAAAGAATACAGACTCTTTCTTAAAATCA
TTAATAAAGCTTAAAAAAGACATAGGAAGAAAAATATTTCTTCTACTGGACAGAGGACTCAGTTCCAAAATCTAG

Upstream 100 bases:

>100_bases
AAATCAAGAATGAGACAAATTATTAAAAATTTAGGATTTAGTAGAATTACATGTAGACCTCAATCAAAAAGACGAAATCA
GGCATTAACAAACGAATTTA

Downstream 100 bases:

>100_bases
TGATAAAAGTAAATGTAACATCACTACACAAAATTATAATTCTATAATTATGTAATGATGTTACGGCACAAATAATGGTA
ACTATAAACCTTACTCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MLKSKKRLLNPDYLFVTQDESSFYLDSNRSKCWAIKGSKPIKFISGSKTKINIGGFYTENRDFYWYDLGIKKNTDSFLKS
LIKLKKDIGRKIFLLLDRGLSSKI

Sequences:

>Translated_104_residues
MLKSKKRLLNPDYLFVTQDESSFYLDSNRSKCWAIKGSKPIKFISGSKTKINIGGFYTENRDFYWYDLGIKKNTDSFLKS
LIKLKKDIGRKIFLLLDRGLSSKI
>Mature_104_residues
MLKSKKRLLNPDYLFVTQDESSFYLDSNRSKCWAIKGSKPIKFISGSKTKINIGGFYTENRDFYWYDLGIKKNTDSFLKS
LIKLKKDIGRKIFLLLDRGLSSKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12124; Mature: 12124

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSKKRLLNPDYLFVTQDESSFYLDSNRSKCWAIKGSKPIKFISGSKTKINIGGFYTEN
CCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEECCCCEEEECCCCEEEEECCEEECC
RDFYWYDLGIKKNTDSFLKSLIKLKKDIGRKIFLLLDRGLSSKI
CCEEEEECCEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MLKSKKRLLNPDYLFVTQDESSFYLDSNRSKCWAIKGSKPIKFISGSKTKINIGGFYTEN
CCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEECCCCEEEECCCCEEEEECCEEECC
RDFYWYDLGIKKNTDSFLKSLIKLKKDIGRKIFLLLDRGLSSKI
CCEEEEECCEECCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA