Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228254

Identifier: 21228254

GI number: 21228254

Start: 2555012

End: 2555632

Strand: Direct

Name: 21228254

Synonym: MM_2152

Alternate gene names: NA

Gene position: 2555012-2555632 (Clockwise)

Preceding gene: 21228252

Following gene: 21228255

Centisome position: 62.37

GC content: 47.5

Gene sequence:

>621_bases
TTGGTTACAGAGACATTAAAAAAGCAAATTGACCGGTTCCTTCTGGCTTTCGGTTTTTCCCTTATGTTCGGGATAATGCT
CCTTGGGCAGGAATTCAGGCAGGCTGTAGGAGAAGCAGTAGGGATCTTTATGGACCCCGTTCTCATGCTGGTCGGGGAGC
AGAACTTCCATCTGATCCTTTTAGTCATGGCTGCCATCACTGCCATTTATGCATCCCTTATCCAGAAGTATACCATGGAC
TGGGACCTGATGAGGAATACTCAGGAGCGCATGAAGGTTTTCCAGAAAGAGTTCCGGGAGGCACAGCTTTCCCAGAATAC
ATATATGCTGAAAAAACTTGAAGACCAGCGTAAAGAGATGATGGAAGACCAGATGAAGATGTCCAAGCAGCAGTTCAAGC
CCATGGCTTATATAAGTATTATCTCCCTGCCTCTCTTCATGTGGGCTTATTATTTCATCAGCGGGCACGAAGCGGCTACC
ATGGTCTTTCCTTTCTGGGGTGAGCAGCTTCTGACCACTTCAGCTATTGGTCCTTTCCAGCACTGGATCTACTGGTACTT
CATCTCCTCTCTTGGAGTCAGCCAGCTTGTCAGGAAAGCTCTTAATATCGGTGGGGTCTGA

Upstream 100 bases:

>100_bases
AAATCATTTTCGGGATTTATTCGTTCAAGCTCATCCGGTAATACTCTCCCGCTTGAAACAATTAAAATTAAATCTATCGA
ACCTTAATGGTGAGGACAAC

Downstream 100 bases:

>100_bases
TGCAGATCACAGTGAGCGGGCTTCCAGGAAGCGGCACTTCCACTCTCTCAAAGCTCCTTGCTGAGTGTTATGACCTCGAG
CTGATTTCTTCGGGGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Adk/Cmk Cluster Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MVTETLKKQIDRFLLAFGFSLMFGIMLLGQEFRQAVGEAVGIFMDPVLMLVGEQNFHLILLVMAAITAIYASLIQKYTMD
WDLMRNTQERMKVFQKEFREAQLSQNTYMLKKLEDQRKEMMEDQMKMSKQQFKPMAYISIISLPLFMWAYYFISGHEAAT
MVFPFWGEQLLTTSAIGPFQHWIYWYFISSLGVSQLVRKALNIGGV

Sequences:

>Translated_206_residues
MVTETLKKQIDRFLLAFGFSLMFGIMLLGQEFRQAVGEAVGIFMDPVLMLVGEQNFHLILLVMAAITAIYASLIQKYTMD
WDLMRNTQERMKVFQKEFREAQLSQNTYMLKKLEDQRKEMMEDQMKMSKQQFKPMAYISIISLPLFMWAYYFISGHEAAT
MVFPFWGEQLLTTSAIGPFQHWIYWYFISSLGVSQLVRKALNIGGV
>Mature_206_residues
MVTETLKKQIDRFLLAFGFSLMFGIMLLGQEFRQAVGEAVGIFMDPVLMLVGEQNFHLILLVMAAITAIYASLIQKYTMD
WDLMRNTQERMKVFQKEFREAQLSQNTYMLKKLEDQRKEMMEDQMKMSKQQFKPMAYISIISLPLFMWAYYFISGHEAAT
MVFPFWGEQLLTTSAIGPFQHWIYWYFISSLGVSQLVRKALNIGGV

Specific function: Unknown

COG id: COG1422

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24053; Mature: 24053

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTETLKKQIDRFLLAFGFSLMFGIMLLGQEFRQAVGEAVGIFMDPVLMLVGEQNFHLIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LVMAAITAIYASLIQKYTMDWDLMRNTQERMKVFQKEFREAQLSQNTYMLKKLEDQRKEM
HHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEDQMKMSKQQFKPMAYISIISLPLFMWAYYFISGHEAATMVFPFWGEQLLTTSAIGPFQ
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHCCCHHH
HWIYWYFISSLGVSQLVRKALNIGGV
HHHHHHHHHHHCHHHHHHHHHHCCCC
>Mature Secondary Structure
MVTETLKKQIDRFLLAFGFSLMFGIMLLGQEFRQAVGEAVGIFMDPVLMLVGEQNFHLIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LVMAAITAIYASLIQKYTMDWDLMRNTQERMKVFQKEFREAQLSQNTYMLKKLEDQRKEM
HHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEDQMKMSKQQFKPMAYISIISLPLFMWAYYFISGHEAATMVFPFWGEQLLTTSAIGPFQ
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHCCCHHH
HWIYWYFISSLGVSQLVRKALNIGGV
HHHHHHHHHHHCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA