| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is rps14P [H]
Identifier: 21228240
GI number: 21228240
Start: 2545910
End: 2546062
Strand: Direct
Name: rps14P [H]
Synonym: MM_2138
Alternate gene names: 21228240
Gene position: 2545910-2546062 (Clockwise)
Preceding gene: 21228239
Following gene: 21228241
Centisome position: 62.15
GC content: 48.37
Gene sequence:
>153_bases ATGACAGATTCTATAGACAAGTCCGGAAGAGGAGTTAACGAGTGCAAGCGGTGCGGTAGAAAGCAGGGTCTTGTCCGCAA ATACGACATTTACCTCTGCAGGCACTGCTTCAGGGAGATTGCCCACGAGATGGGCTTTGAGAAGTATTCTTAA
Upstream 100 bases:
>100_bases GAGGAGAATTGCAACCCGCAAGATCCCGACTGACCACAGGGTCACGGTGGATGATGCGATCGCTTTCCTTAACGAAAGTT ACGGCGTGGAGGTCATGTAA
Downstream 100 bases:
>100_bases GGTGATTTAAATGGTATTACTTGATCCTCTTGCAAACGCCCTTTCCACTATTAAAAATGCTGAAGCCATTGGGAAGAGCT CCTGTATTGTCAGGCCTGCT
Product: 30S ribosomal protein S14P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MTDSIDKSGRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKYS
Sequences:
>Translated_50_residues MTDSIDKSGRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKYS >Mature_49_residues TDSIDKSGRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKYS
Specific function: Binds 16S rRNA, required for the assembly of 30S particles [H]
COG id: COG0199
COG function: function code J; Ribosomal protein S14
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein S14P family. Zinc- binding S14P subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001209 - InterPro: IPR018271 [H]
Pfam domain/function: PF00253 Ribosomal_S14 [H]
EC number: NA
Molecular weight: Translated: 5916; Mature: 5785
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS00527 RIBOSOMAL_S14
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 12.0 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSIDKSGRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKYS CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TDSIDKSGRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKYS CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]