Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is rps14P [H]

Identifier: 21228240

GI number: 21228240

Start: 2545910

End: 2546062

Strand: Direct

Name: rps14P [H]

Synonym: MM_2138

Alternate gene names: 21228240

Gene position: 2545910-2546062 (Clockwise)

Preceding gene: 21228239

Following gene: 21228241

Centisome position: 62.15

GC content: 48.37

Gene sequence:

>153_bases
ATGACAGATTCTATAGACAAGTCCGGAAGAGGAGTTAACGAGTGCAAGCGGTGCGGTAGAAAGCAGGGTCTTGTCCGCAA
ATACGACATTTACCTCTGCAGGCACTGCTTCAGGGAGATTGCCCACGAGATGGGCTTTGAGAAGTATTCTTAA

Upstream 100 bases:

>100_bases
GAGGAGAATTGCAACCCGCAAGATCCCGACTGACCACAGGGTCACGGTGGATGATGCGATCGCTTTCCTTAACGAAAGTT
ACGGCGTGGAGGTCATGTAA

Downstream 100 bases:

>100_bases
GGTGATTTAAATGGTATTACTTGATCCTCTTGCAAACGCCCTTTCCACTATTAAAAATGCTGAAGCCATTGGGAAGAGCT
CCTGTATTGTCAGGCCTGCT

Product: 30S ribosomal protein S14P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 50; Mature: 49

Protein sequence:

>50_residues
MTDSIDKSGRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKYS

Sequences:

>Translated_50_residues
MTDSIDKSGRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKYS
>Mature_49_residues
TDSIDKSGRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKYS

Specific function: Binds 16S rRNA, required for the assembly of 30S particles [H]

COG id: COG0199

COG function: function code J; Ribosomal protein S14

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S14P family. Zinc- binding S14P subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001209
- InterPro:   IPR018271 [H]

Pfam domain/function: PF00253 Ribosomal_S14 [H]

EC number: NA

Molecular weight: Translated: 5916; Mature: 5785

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00527 RIBOSOMAL_S14

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
12.0 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSIDKSGRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKYS
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDSIDKSGRGVNECKRCGRKQGLVRKYDIYLCRHCFREIAHEMGFEKYS
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]