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The map label for this gene is rpl24p

Identifier: 21228237

GI number: 21228237

Start: 2544318

End: 2544686

Strand: Direct

Name: rpl24p

Synonym: MM_2135

Alternate gene names: 21228237

Gene position: 2544318-2544686 (Clockwise)

Preceding gene: 161485669

Following gene: 21228238

Centisome position: 62.11

GC content: 50.14

Gene sequence:

>369_bases
TTGTCTGAGGTGATTGAAATGGTATCCAAACAGCCCAGAAAACAGAGAAAGGCAAGATATACCGCACCTCTCCATATCAG
GCAGAAATTCATGGGTGCAAGGCTCAGTGAGGCGCTTGCCAAGCAGTACGGCACAAGAAGTGCTGCAGTTATCACTGGCG
ACACAGTAAAGATCATGCGCGGAGACTTCAAGGGCACGGAAGGAAAAGTCCAGTCCGTATCTCTTATGGACGGCACTATT
GCAGTGGACGGGGTCATTTCCACAAAAGTGGACGGCACCGAAGTCCCGAGGCCCATCAACCCCTCCAATGTTATGATCAC
AAAACTGGAAATGAAAGACGGGCGCAGAGCGTCAAGCATTAAGAAGTGA

Upstream 100 bases:

>100_bases
ACGGACGAAGATGGAATCCCGAAAGGAACGGACATTAAAGGTCCTGTTGCCAGGGAAGTTGCAGAAAGGTTCCCCAAGAT
CGGGACCACCGCATCCATTA

Downstream 100 bases:

>100_bases
GGCAGGTGATTTTGTGACACACCAGAAAAGATTATCAGTTCCTAAGAGCTGGAAGGTTGGGAGAAAAGGTAACAAGTGGA
TCTCCACTACCCGCCCGGGG

Product: 50S ribosomal protein L24P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSEVIEMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKGTEGKVQSVSLMDGTI
AVDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRRASSIKK

Sequences:

>Translated_122_residues
MSEVIEMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKGTEGKVQSVSLMDGTI
AVDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRRASSIKK
>Mature_121_residues
SEVIEMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKGTEGKVQSVSLMDGTIA
VDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRRASSIKK

Specific function: Located at the polypeptide exit tunnel on the outside of the subunit

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family

Homologues:

Organism=Homo sapiens, GI4506621, Length=104, Percent_Identity=38.4615384615385, Blast_Score=72, Evalue=1e-13,
Organism=Homo sapiens, GI7705813, Length=104, Percent_Identity=37.5, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17535693, Length=115, Percent_Identity=37.3913043478261, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17535691, Length=102, Percent_Identity=35.2941176470588, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI32564329, Length=102, Percent_Identity=35.2941176470588, Blast_Score=62, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6321471, Length=110, Percent_Identity=40.9090909090909, Blast_Score=80, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6323376, Length=110, Percent_Identity=40.9090909090909, Blast_Score=80, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21357853, Length=112, Percent_Identity=37.5, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24_METMA (Q8PV39)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_634159.1
- ProteinModelPortal:   Q8PV39
- SMR:   Q8PV39
- GeneID:   1480477
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_2135
- NMPDR:   fig|192952.1.peg.2135
- HOGENOM:   HBG714769
- OMA:   FLYNAPL
- ProtClustDB:   PRK01191
- BioCyc:   MMAZ192952:MM2135-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01326_A
- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR005756
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.200
- PANTHER:   PTHR11143
- TIGRFAMs:   TIGR01080

Pfam domain/function: PF00467 KOW; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 13408; Mature: 13277

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVIEMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMR
CHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEE
GDFKGTEGKVQSVSLMDGTIAVDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRRASSI
CCCCCCCCCEEEEEEECCEEEECCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
KK
CC
>Mature Secondary Structure 
SEVIEMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMR
HHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEE
GDFKGTEGKVQSVSLMDGTIAVDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRRASSI
CCCCCCCCCEEEEEEECCEEEECCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824