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The map label for this gene is rnp1 [H]

Identifier: 21228234

GI number: 21228234

Start: 2543264

End: 2543596

Strand: Direct

Name: rnp1 [H]

Synonym: MM_2132

Alternate gene names: 21228234

Gene position: 2543264-2543596 (Clockwise)

Preceding gene: 21228233

Following gene: 161485670

Centisome position: 62.09

GC content: 43.24

Gene sequence:

>333_bases
ATGAGATCTAAAGTGGAAATTCTGCCTTCGACTCTTATCTTTCATGAACTGATAGGGCTCGAAATTAAGGTGAGTAATTC
CACTAATCCATCATTAATCGGAATCCGGGGCAGAGTAATCAACGAGACGAAAAATATGCTTGTGGTAGAAAACTCAGAGT
CCCGGGAACTGAAGATTCCCAAGGCGGATTCGGAATTTGTTTTCCGGATCCCTGCCGAGCTCTCAGAAAAAGGCCGCAGA
TCCGATATATTCGTTAAAATTCAGGGAAACCTGCTGCTCTCACAACCCGAAAATCGGATCAAGAACATTAAAAAGCTACG
TAAATGGGGCTAA

Upstream 100 bases:

>100_bases
AGAGCTCTTACCTCAGCTGGTGGAGCTCCGGACAACCCTGGCAGGATCGGAGAAATCAGGAGAACGATTGCCCGTATAAA
GACAATTCAGCACGAGCTAA

Downstream 100 bases:

>100_bases
ATTCATGGCAAGAGATATTGGATTAAATATACCGGCGCCATCAGAGGAATGTGACGATGCATACTGTCCCTTCCACGGAA
CACTTCCGGTAAGAGGACAG

Product: ribonuclease P protein component 1

Products: NA

Alternate protein names: RNase P component 1 [H]

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MRSKVEILPSTLIFHELIGLEIKVSNSTNPSLIGIRGRVINETKNMLVVENSESRELKIPKADSEFVFRIPAELSEKGRR
SDIFVKIQGNLLLSQPENRIKNIKKLRKWG

Sequences:

>Translated_110_residues
MRSKVEILPSTLIFHELIGLEIKVSNSTNPSLIGIRGRVINETKNMLVVENSESRELKIPKADSEFVFRIPAELSEKGRR
SDIFVKIQGNLLLSQPENRIKNIKKLRKWG
>Mature_110_residues
MRSKVEILPSTLIFHELIGLEIKVSNSTNPSLIGIRGRVINETKNMLVVENSESRELKIPKADSEFVFRIPAELSEKGRR
SDIFVKIQGNLLLSQPENRIKNIKKLRKWG

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends [H]

COG id: COG1588

COG function: function code J; RNase P/RNase MRP subunit p29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002730 [H]

Pfam domain/function: PF01868 UPF0086 [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 12582; Mature: 12582

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSKVEILPSTLIFHELIGLEIKVSNSTNPSLIGIRGRVINETKNMLVVENSESRELKIP
CCCCHHHCHHHHHHHHHHCEEEEECCCCCCEEEEEECEEECCCCCEEEEECCCCCEEECC
KADSEFVFRIPAELSEKGRRSDIFVKIQGNLLLSQPENRIKNIKKLRKWG
CCCCCEEEECCCHHHCCCCCCEEEEEEECCEEEECCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSKVEILPSTLIFHELIGLEIKVSNSTNPSLIGIRGRVINETKNMLVVENSESRELKIP
CCCCHHHCHHHHHHHHHHCEEEEECCCCCCEEEEEECEEECCCCCEEEEECCCCCEEECC
KADSEFVFRIPAELSEKGRRSDIFVKIQGNLLLSQPENRIKNIKKLRKWG
CCCCCEEEECCCHHHCCCCCCEEEEEEECCEEEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]