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The map label for this gene is rplW [H]

Identifier: 21228228

GI number: 21228228

Start: 2540279

End: 2540527

Strand: Direct

Name: rplW [H]

Synonym: MM_2126

Alternate gene names: 21228228

Gene position: 2540279-2540527 (Clockwise)

Preceding gene: 21228227

Following gene: 21228229

Centisome position: 62.01

GC content: 42.97

Gene sequence:

>249_bases
ATGAGTTCTATCAATTATCCATTTGTTACTGAAAAAGCGATGATGCTGCTTGACGAAAACAAGCTCCAGTTCATCGTTGA
CACCAGGTCAAACAAAAAGCAGATCGTAGAAGATGTTGAGAAGCTGTACGGGTTCAAAGTAAAAGCCGTGCGGACCATGA
CCACAATGAAGGGTACAAAAAAAGCAGTCCTTGCCTTTGAAGAACCTGAAGCGGCACATGAGATTGCAACCCGAATAGGA
CTTATGTGA

Upstream 100 bases:

>100_bases
TAGACTCACTGAATGCCGAACTGCTCGCACCGGGTACGCACGCAGGTCGCCTTACTGTCTGGACAGAGTCTGCAATTGGA
AAACTGGAGGGCGCATTCCA

Downstream 100 bases:

>100_bases
GGTGTGATCCATGGGTAAAAGACTGATATCACAGAACAGGGGTCGAGGCACTCCTACCTACAGAGCTCCTTCTCACAAGT
ACAAGGCAGACCTGAGGCAC

Product: 50S ribosomal protein L23P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSSINYPFVTEKAMMLLDENKLQFIVDTRSNKKQIVEDVEKLYGFKVKAVRTMTTMKGTKKAVLAFEEPEAAHEIATRIG
LM

Sequences:

>Translated_82_residues
MSSINYPFVTEKAMMLLDENKLQFIVDTRSNKKQIVEDVEKLYGFKVKAVRTMTTMKGTKKAVLAFEEPEAAHEIATRIG
LM
>Mature_81_residues
SSINYPFVTEKAMMLLDENKLQFIVDTRSNKKQIVEDVEKLYGFKVKAVRTMTTMKGTKKAVLAFEEPEAAHEIATRIGL
M

Specific function: Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome [H]

COG id: COG0089

COG function: function code J; Ribosomal protein L23

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L23P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012677
- InterPro:   IPR019985
- InterPro:   IPR012678
- InterPro:   IPR013025 [H]

Pfam domain/function: PF00276 Ribosomal_L23 [H]

EC number: NA

Molecular weight: Translated: 9355; Mature: 9224

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSINYPFVTEKAMMLLDENKLQFIVDTRSNKKQIVEDVEKLYGFKVKAVRTMTTMKGTK
CCCCCCCEECHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
KAVLAFEEPEAAHEIATRIGLM
EEEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SSINYPFVTEKAMMLLDENKLQFIVDTRSNKKQIVEDVEKLYGFKVKAVRTMTTMKGTK
CCCCCCEECHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
KAVLAFEEPEAAHEIATRIGLM
EEEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]