Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228219

Identifier: 21228219

GI number: 21228219

Start: 2528662

End: 2531085

Strand: Direct

Name: 21228219

Synonym: MM_2117

Alternate gene names: NA

Gene position: 2528662-2531085 (Clockwise)

Preceding gene: 21228218

Following gene: 21228220

Centisome position: 61.73

GC content: 43.36

Gene sequence:

>2424_bases
ATGCCACACTTAAAAAAATGTGTTTTTGTAGACGATTTGCTTGCAGTTACTATTCTTTCATGTCTGGGAGTTATTTTTGT
ACTTGTTCCTCCATTCAATGAAACATTTCTTAGAATTCCTGTAGCGCTGTCCCTCTTTTTTTTCGTTCCCGGTTATGCTT
TTATATCCGCACTCTTTCCTGGTAATAAAGAAATCAGCGGGATAGAACGTTTTACATTAAGTGTTGGCTTCAGTCTTGTA
CTTACAGTTTTTGACGGCTTTCTAATAAGCCTGCTTCCCTGGGGCTACCGCCCTGCCCCGATAGTTATATCCATTCTTGG
GATCACGACTTTCTTCAGTATTCTTGCAATTTTTACACGAAAATTAAAAGATGAAAGCGAGCAGTTCTCTTTTTCATTAA
AAGAATTCATAAAATCCATTCAGTCGGATGAGGTTGACGAAGAGCCTGAAGACCCTGAAGAGCCTGAAGAAATGACTTCT
CCAGCCGAAGTCAGGCGTTTTCACAGGTCAAAAAGCAAAGTTAAAGCAAAGGGTTTGAAGTACTCTTCGGGTACTGAGGC
TAAAACCAAAATCAGAAAAAAGCCCCTGCCTCCGGAAATTGAAAAGGCTCTCGTAATTGCTTTGATAGGCTCTATTATTA
TCTCAAGTGCAATGCTCGCATATGCCAAGATGACCCGGGAAAAGGAGACTTTTACAATGCTGTATCTCCTTGGTCCCGAC
GGAAAAGCCGAAGGTTATCCGAATGAGAGCTTCATCAATGTCCCTGTTAACGTCACAGTAGGAATTGAAAACCATGAACT
TCAGAGTGTAAACTATATCCTCCAGATGAAAGTCGATGAGGAGGTAATTCAGGAGCTTAATGTTCCTTTGAAAGACGGAG
AGGTATGGCAGAAGAATTTGACTTACACGCGTCACAGCCTGAAAAATGACAGGTCCAAACTTGAGTTTGCTCTTTTTAAG
GAGAAACCGGATTATTTCTCTTACAGGTCTGTCCATCTTTATTTGGATAATAATAACACCTTCACTCATCTGGTCGATGA
GAAGTACACTGATGCCTCATCGCTTCCGGTGATTAAAAATGGAGAGATGGAATCTTCAGAAATATGGAACTTTACTTCAA
ATACTGAGTATATAACAGGTTCTTATGTAAGTGGGTCCGGAGTAAACTCCTCCCTCGCATACAGAATAAGCAGCTCCTAT
AATGGAAGCCTTTTTGATCAGCCAGGGCAATCCGGTGAAATCTCTCAAAATATAACATGTGATGAAGACACCATGGCTGT
GCTCTCGGCATACGTGATAGATAACTTCAACTTAACTTCTAAGGAAGACTCTCAGCTAAAATACGTTGCAGTTAATGGAG
ACACCGTGTGGACAGACGGGGTCAGCGAAGCGGAAGGGTGGCAGCACCTTGAAATTCCGGTATCTCTTCAGGCAGGAGAG
AACAACCTCTCATTCGGTTTGAGGCAGATGCCGGGTGAAATCGTACCTGTTGACGTTTTCTGGGATAGAATTTCCTTTAA
ACCTCTTTCAGAACTATCTGCTTATATTTCGGAGACAAATACTGTCGAAACCGTACCTCCAACCTCAAGTGTGCTGGGGC
TTCCTGCATTCACGGACAACAAAACCTTTACGGTTTCCTGGAACGGGACAGATGACCTTTCTGGAATTGCTTATTATTCC
ATAGACTCAAGCACTGACGGGGTTAACTGGGAGCCATGGATTTCAAAGACAACAGATAACTCTTCCAGCTTTACCGGAAA
GGATAACCAGACCTATTACTTCCGTTCAAGAGCTGTCGATAGGGCAGGAAATGAAGAGCCTGAACATCCGGAACCCGATA
CCCAGACTCAAATTTACACCGGCGCCCCCAGGGTCATGCTGGACATCTTCCCTAACCCCTGCAAGACTGCCACAACCTTT
AATGTAACATATCCGGTGCCTCTCCAGTCCGCAGTATGCCTGGTTACAAGGGACGGTTTTGAGTCCGAATCCTGCGAGCT
GACAACTTCGGATAACATTACATGGACGGGTAATTACATTGCAAGGAACGGAGACTACTTCAGAGTAGAAGCTGTGTGTA
CGGATGTCTTTGGAAATACGGTCTCCACTCTCGATGAACTCTTTGTCGATCGCTCAATTTCAAACTTTACAATTGAGCTT
ACCCCTAGAACCATAAATAAGGGAGACCTGGAAATCAACGTTACTCCCTCAACCACTTTAAAATCCAAACCCTCAGTTTC
AGTCTCGGGTAGTCCAGCGGTTAATGTCACCTATCTGACATACTCGGACGGGTCTTACTACTATAAAGCAAGAATTAAGT
CCGAACTGAACGAAGGAGAACATAAAGTATCGGTAAATGGTTATGACCTGGAATCCGAACAGATGACAGGCAACACCACT
TTTATAGTTGACCATTCTGGTTGA

Upstream 100 bases:

>100_bases
TACAGGTCACAGGTTTTTGCTCCCGGGTTATAAAGTCTCGGAAAAATATTTTTAATATTGGGAAAATATTATATCTTTTG
TTGAATTACTTCATAGTAGA

Downstream 100 bases:

>100_bases
GCAGTTGCTTTGCTGGATAATCTGTACAATGCCAGTTTGATCAACTGACACTATTTTCTTCTATGTTTTTTACATCCTTA
AATTTATACTATTTAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 807; Mature: 806

Protein sequence:

>807_residues
MPHLKKCVFVDDLLAVTILSCLGVIFVLVPPFNETFLRIPVALSLFFFVPGYAFISALFPGNKEISGIERFTLSVGFSLV
LTVFDGFLISLLPWGYRPAPIVISILGITTFFSILAIFTRKLKDESEQFSFSLKEFIKSIQSDEVDEEPEDPEEPEEMTS
PAEVRRFHRSKSKVKAKGLKYSSGTEAKTKIRKKPLPPEIEKALVIALIGSIIISSAMLAYAKMTREKETFTMLYLLGPD
GKAEGYPNESFINVPVNVTVGIENHELQSVNYILQMKVDEEVIQELNVPLKDGEVWQKNLTYTRHSLKNDRSKLEFALFK
EKPDYFSYRSVHLYLDNNNTFTHLVDEKYTDASSLPVIKNGEMESSEIWNFTSNTEYITGSYVSGSGVNSSLAYRISSSY
NGSLFDQPGQSGEISQNITCDEDTMAVLSAYVIDNFNLTSKEDSQLKYVAVNGDTVWTDGVSEAEGWQHLEIPVSLQAGE
NNLSFGLRQMPGEIVPVDVFWDRISFKPLSELSAYISETNTVETVPPTSSVLGLPAFTDNKTFTVSWNGTDDLSGIAYYS
IDSSTDGVNWEPWISKTTDNSSSFTGKDNQTYYFRSRAVDRAGNEEPEHPEPDTQTQIYTGAPRVMLDIFPNPCKTATTF
NVTYPVPLQSAVCLVTRDGFESESCELTTSDNITWTGNYIARNGDYFRVEAVCTDVFGNTVSTLDELFVDRSISNFTIEL
TPRTINKGDLEINVTPSTTLKSKPSVSVSGSPAVNVTYLTYSDGSYYYKARIKSELNEGEHKVSVNGYDLESEQMTGNTT
FIVDHSG

Sequences:

>Translated_807_residues
MPHLKKCVFVDDLLAVTILSCLGVIFVLVPPFNETFLRIPVALSLFFFVPGYAFISALFPGNKEISGIERFTLSVGFSLV
LTVFDGFLISLLPWGYRPAPIVISILGITTFFSILAIFTRKLKDESEQFSFSLKEFIKSIQSDEVDEEPEDPEEPEEMTS
PAEVRRFHRSKSKVKAKGLKYSSGTEAKTKIRKKPLPPEIEKALVIALIGSIIISSAMLAYAKMTREKETFTMLYLLGPD
GKAEGYPNESFINVPVNVTVGIENHELQSVNYILQMKVDEEVIQELNVPLKDGEVWQKNLTYTRHSLKNDRSKLEFALFK
EKPDYFSYRSVHLYLDNNNTFTHLVDEKYTDASSLPVIKNGEMESSEIWNFTSNTEYITGSYVSGSGVNSSLAYRISSSY
NGSLFDQPGQSGEISQNITCDEDTMAVLSAYVIDNFNLTSKEDSQLKYVAVNGDTVWTDGVSEAEGWQHLEIPVSLQAGE
NNLSFGLRQMPGEIVPVDVFWDRISFKPLSELSAYISETNTVETVPPTSSVLGLPAFTDNKTFTVSWNGTDDLSGIAYYS
IDSSTDGVNWEPWISKTTDNSSSFTGKDNQTYYFRSRAVDRAGNEEPEHPEPDTQTQIYTGAPRVMLDIFPNPCKTATTF
NVTYPVPLQSAVCLVTRDGFESESCELTTSDNITWTGNYIARNGDYFRVEAVCTDVFGNTVSTLDELFVDRSISNFTIEL
TPRTINKGDLEINVTPSTTLKSKPSVSVSGSPAVNVTYLTYSDGSYYYKARIKSELNEGEHKVSVNGYDLESEQMTGNTT
FIVDHSG
>Mature_806_residues
PHLKKCVFVDDLLAVTILSCLGVIFVLVPPFNETFLRIPVALSLFFFVPGYAFISALFPGNKEISGIERFTLSVGFSLVL
TVFDGFLISLLPWGYRPAPIVISILGITTFFSILAIFTRKLKDESEQFSFSLKEFIKSIQSDEVDEEPEDPEEPEEMTSP
AEVRRFHRSKSKVKAKGLKYSSGTEAKTKIRKKPLPPEIEKALVIALIGSIIISSAMLAYAKMTREKETFTMLYLLGPDG
KAEGYPNESFINVPVNVTVGIENHELQSVNYILQMKVDEEVIQELNVPLKDGEVWQKNLTYTRHSLKNDRSKLEFALFKE
KPDYFSYRSVHLYLDNNNTFTHLVDEKYTDASSLPVIKNGEMESSEIWNFTSNTEYITGSYVSGSGVNSSLAYRISSSYN
GSLFDQPGQSGEISQNITCDEDTMAVLSAYVIDNFNLTSKEDSQLKYVAVNGDTVWTDGVSEAEGWQHLEIPVSLQAGEN
NLSFGLRQMPGEIVPVDVFWDRISFKPLSELSAYISETNTVETVPPTSSVLGLPAFTDNKTFTVSWNGTDDLSGIAYYSI
DSSTDGVNWEPWISKTTDNSSSFTGKDNQTYYFRSRAVDRAGNEEPEHPEPDTQTQIYTGAPRVMLDIFPNPCKTATTFN
VTYPVPLQSAVCLVTRDGFESESCELTTSDNITWTGNYIARNGDYFRVEAVCTDVFGNTVSTLDELFVDRSISNFTIELT
PRTINKGDLEINVTPSTTLKSKPSVSVSGSPAVNVTYLTYSDGSYYYKARIKSELNEGEHKVSVNGYDLESEQMTGNTTF
IVDHSG

Specific function: Unknown

COG id: COG4743

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89982; Mature: 89850

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHLKKCVFVDDLLAVTILSCLGVIFVLVPPFNETFLRIPVALSLFFFVPGYAFISALFP
CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCC
GNKEISGIERFTLSVGFSLVLTVFDGFLISLLPWGYRPAPIVISILGITTFFSILAIFTR
CCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KLKDESEQFSFSLKEFIKSIQSDEVDEEPEDPEEPEEMTSPAEVRRFHRSKSKVKAKGLK
HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCC
YSSGTEAKTKIRKKPLPPEIEKALVIALIGSIIISSAMLAYAKMTREKETFTMLYLLGPD
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
GKAEGYPNESFINVPVNVTVGIENHELQSVNYILQMKVDEEVIQELNVPLKDGEVWQKNL
CCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHCCCCCCCCCHHHHCC
TYTRHSLKNDRSKLEFALFKEKPDYFSYRSVHLYLDNNNTFTHLVDEKYTDASSLPVIKN
HHHHHHHHCCHHHEEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEC
GEMESSEIWNFTSNTEYITGSYVSGSGVNSSLAYRISSSYNGSLFDQPGQSGEISQNITC
CCCCCHHEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
DEDTMAVLSAYVIDNFNLTSKEDSQLKYVAVNGDTVWTDGVSEAEGWQHLEIPVSLQAGE
CHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCEEEEEEEEEECCC
NNLSFGLRQMPGEIVPVDVFWDRISFKPLSELSAYISETNTVETVPPTSSVLGLPAFTDN
CCCCCCHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCEEECCCCCHHEECCEECCC
KTFTVSWNGTDDLSGIAYYSIDSSTDGVNWEPWISKTTDNSSSFTGKDNQTYYFRSRAVD
CEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHH
RAGNEEPEHPEPDTQTQIYTGAPRVMLDIFPNPCKTATTFNVTYPVPLQSAVCLVTRDGF
CCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEECCC
ESESCELTTSDNITWTGNYIARNGDYFRVEAVCTDVFGNTVSTLDELFVDRSISNFTIEL
CCCCCEEEECCCEEECCCEEEECCCEEEEEEEEHHHHCCHHHHHHHHHHCCCCCCEEEEE
TPRTINKGDLEINVTPSTTLKSKPSVSVSGSPAVNVTYLTYSDGSYYYKARIKSELNEGE
ECCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEEEEEECCCCEEEEEEEHHHCCCCC
HKVSVNGYDLESEQMTGNTTFIVDHSG
EEEEECCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
PHLKKCVFVDDLLAVTILSCLGVIFVLVPPFNETFLRIPVALSLFFFVPGYAFISALFP
CCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHCC
GNKEISGIERFTLSVGFSLVLTVFDGFLISLLPWGYRPAPIVISILGITTFFSILAIFTR
CCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KLKDESEQFSFSLKEFIKSIQSDEVDEEPEDPEEPEEMTSPAEVRRFHRSKSKVKAKGLK
HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCC
YSSGTEAKTKIRKKPLPPEIEKALVIALIGSIIISSAMLAYAKMTREKETFTMLYLLGPD
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
GKAEGYPNESFINVPVNVTVGIENHELQSVNYILQMKVDEEVIQELNVPLKDGEVWQKNL
CCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHCCCCCCCCCHHHHCC
TYTRHSLKNDRSKLEFALFKEKPDYFSYRSVHLYLDNNNTFTHLVDEKYTDASSLPVIKN
HHHHHHHHCCHHHEEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEC
GEMESSEIWNFTSNTEYITGSYVSGSGVNSSLAYRISSSYNGSLFDQPGQSGEISQNITC
CCCCCHHEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
DEDTMAVLSAYVIDNFNLTSKEDSQLKYVAVNGDTVWTDGVSEAEGWQHLEIPVSLQAGE
CHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCEEEEEEEEEECCC
NNLSFGLRQMPGEIVPVDVFWDRISFKPLSELSAYISETNTVETVPPTSSVLGLPAFTDN
CCCCCCHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCEEECCCCCHHEECCEECCC
KTFTVSWNGTDDLSGIAYYSIDSSTDGVNWEPWISKTTDNSSSFTGKDNQTYYFRSRAVD
CEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHH
RAGNEEPEHPEPDTQTQIYTGAPRVMLDIFPNPCKTATTFNVTYPVPLQSAVCLVTRDGF
CCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEECCC
ESESCELTTSDNITWTGNYIARNGDYFRVEAVCTDVFGNTVSTLDELFVDRSISNFTIEL
CCCCCEEEECCCEEECCCEEEECCCEEEEEEEEHHHHCCHHHHHHHHHHCCCCCCEEEEE
TPRTINKGDLEINVTPSTTLKSKPSVSVSGSPAVNVTYLTYSDGSYYYKARIKSELNEGE
ECCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEEEEEECCCCEEEEEEEHHHCCCCC
HKVSVNGYDLESEQMTGNTTFIVDHSG
EEEEECCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA