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The map label for this gene is 21228192

Identifier: 21228192

GI number: 21228192

Start: 2494808

End: 2495374

Strand: Direct

Name: 21228192

Synonym: MM_2090

Alternate gene names: NA

Gene position: 2494808-2495374 (Clockwise)

Preceding gene: 21228185

Following gene: 21228194

Centisome position: 60.9

GC content: 44.97

Gene sequence:

>567_bases
TTGAATAAAATATATCGATCGATAGATATTTATTACGTACGACATAAGTGTATTTTAATGGTCAACAGAGTTAAGCGCAG
GGTATCTTGCTTTCCAAAGGCCACCTATTACAAGCCCAGGGAAATCCCTCTTTGCTGTCTGGAAACTGCCAATCTATCCA
TAGAAGAGATTGAGGCCATTCGTCTTTGCGACCTTCTCCAGATGGAACAGAACGAGGCTGCTGACAGAATGGGAATATCC
CGGAAAACTTTCTGGAGCGACCTCCAGAGGGCACGACAGAAGGTGGCTGATGCTCTTGTCAACGGAAAAGCGATCGAAAT
TTCCGGAGGAGAATACGTTAATACCGGTGAGTGCAGGATCCATTTTCTTTGCAAAGAATGCGATCATGTGTGGGAAGCAA
AGTTTGACCAGTCCCGACCCACAAGCTGCCCGAACTGTGGCTCCAATCTAATTTTCCGACTCGGCGGCGATGGGAAAGGA
AAGAGGTTTATTGAGAATGATTACTGTTGCCCTAAAGAAAAGGAAAGCAGCAGGAGTACTGATGAAGGAAGTAAAAAAAA
GCGATAA

Upstream 100 bases:

>100_bases
ATTCAGGATGATGAGAAAGCTATTGCTGAGTTTAAGAGGATTTTAAAACCATGGAAATAGCAATTCTTCCAGTCTTTATT
ATTTTTAAATTTTAATCCAT

Downstream 100 bases:

>100_bases
TAACTATACCATCGATGAGTGATCCTGGACTGTATTTATCAAGCTTTTTTAAACTCTGAACTCCTTCAAGCTTTTTTTGC
TTCCCCCTTTTCCAGAATTC

Product: HTH DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNKIYRSIDIYYVRHKCILMVNRVKRRVSCFPKATYYKPREIPLCCLETANLSIEEIEAIRLCDLLQMEQNEAADRMGIS
RKTFWSDLQRARQKVADALVNGKAIEISGGEYVNTGECRIHFLCKECDHVWEAKFDQSRPTSCPNCGSNLIFRLGGDGKG
KRFIENDYCCPKEKESSRSTDEGSKKKR

Sequences:

>Translated_188_residues
MNKIYRSIDIYYVRHKCILMVNRVKRRVSCFPKATYYKPREIPLCCLETANLSIEEIEAIRLCDLLQMEQNEAADRMGIS
RKTFWSDLQRARQKVADALVNGKAIEISGGEYVNTGECRIHFLCKECDHVWEAKFDQSRPTSCPNCGSNLIFRLGGDGKG
KRFIENDYCCPKEKESSRSTDEGSKKKR
>Mature_188_residues
MNKIYRSIDIYYVRHKCILMVNRVKRRVSCFPKATYYKPREIPLCCLETANLSIEEIEAIRLCDLLQMEQNEAADRMGIS
RKTFWSDLQRARQKVADALVNGKAIEISGGEYVNTGECRIHFLCKECDHVWEAKFDQSRPTSCPNCGSNLIFRLGGDGKG
KRFIENDYCCPKEKESSRSTDEGSKKKR

Specific function: Unknown

COG id: COG1342

COG function: function code R; Predicted DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0251 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002852 [H]

Pfam domain/function: PF02001 DUF134 [H]

EC number: NA

Molecular weight: Translated: 21703; Mature: 21703

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIYRSIDIYYVRHKCILMVNRVKRRVSCFPKATYYKPREIPLCCLETANLSIEEIEAI
CCCHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHH
RLCDLLQMEQNEAADRMGISRKTFWSDLQRARQKVADALVNGKAIEISGGEYVNTGECRI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCEEE
HFLCKECDHVWEAKFDQSRPTSCPNCGSNLIFRLGGDGKGKRFIENDYCCPKEKESSRST
EEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
DEGSKKKR
CCCCCCCC
>Mature Secondary Structure
MNKIYRSIDIYYVRHKCILMVNRVKRRVSCFPKATYYKPREIPLCCLETANLSIEEIEAI
CCCHHHHEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHH
RLCDLLQMEQNEAADRMGISRKTFWSDLQRARQKVADALVNGKAIEISGGEYVNTGECRI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCEEE
HFLCKECDHVWEAKFDQSRPTSCPNCGSNLIFRLGGDGKGKRFIENDYCCPKEKESSRST
EEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
DEGSKKKR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]