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The map label for this gene is ybbM [H]

Identifier: 21228182

GI number: 21228182

Start: 2480108

End: 2480911

Strand: Reverse

Name: ybbM [H]

Synonym: MM_2080

Alternate gene names: 21228182

Gene position: 2480911-2480108 (Counterclockwise)

Preceding gene: 21228183

Following gene: 21228179

Centisome position: 60.56

GC content: 44.78

Gene sequence:

>804_bases
ATGGCAAGCCCCGATATATCGATAACTTCCCTGCTGCTCTGCTTTCTGCTGCTTATAATTCCTCTGGCTATCAGTTACAG
AATAAAGCTTCGTATTTCCCGGGCAACAATAGATGCGGTTTCCCGCATGACAGTCCAGCTCGTTATGGCAGGAGTGTTTT
TGACCTATGTCTTTGACCTGAACAACGGAGCTCTGAACATGGCGTGGGTTCTGGGAATGGTTGTAATTGCCAGTTACACG
ACTATAAAAAATGTAGAGCTTAAAATGGAAAAACTACTTCTGCCTGTTGTTCTTTCCTTTATGGCAGCAAATATAAGTGT
GCTGCTCTACTTCAACGAATTCGTGCTTGACCTTGGAAACCTCCTGGAAGCCCGCTACCTGATCCCTGTAGGAGGCATGA
TTCTCGGCAATTCGCTGAGGGGCAATATTGTTGGTATGGGAGAATTTTACGAGGATATACGCAGAAACGAAAACAGATAC
CTTTACAACCTTTCTCTCGGGGCGAGCAGGTACGAAGCCCTTACACCTTATATTCGAAAATGCCTTCGCTCCGCTCTCAA
GCCTACCCTTGCCAACATTGCAACTGCAGGGCTTGTCTTTCTTCCAGGGATGATGACAGGGCAGATCCTCGGAGGTGCAA
GCCCGATGCTTGCAATCAAGTATCAGATCTCAATAATGATTGCTCTTTATGTTTCCACGTCCATGAGTACTGCATTCAGT
ATTTTCAGCACGATTCATACCACTTTTGACGAATACGGGCTGGTAAAGAAAGAAATATACAGAGAAAAAAGAAAAAGAAA
ATAG

Upstream 100 bases:

>100_bases
ACGCAGTTTGAGCCTTAAAAAGAAAAGTAATGATAGAACAGGAAAGATAACAAAAATAGAGTCAATAGAGTCAGGAAAAA
ATGAAAAGAGGAATTTTCAA

Downstream 100 bases:

>100_bases
AAAGAAGAGGTCACAGTGAGCCTGAATCATTACAGTAAACCCGAATCATCACAGTGGGTCTGAATCGTCACAGTAAACAT
GAATCGTCACAGTAAACATG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MASPDISITSLLLCFLLLIIPLAISYRIKLRISRATIDAVSRMTVQLVMAGVFLTYVFDLNNGALNMAWVLGMVVIASYT
TIKNVELKMEKLLLPVVLSFMAANISVLLYFNEFVLDLGNLLEARYLIPVGGMILGNSLRGNIVGMGEFYEDIRRNENRY
LYNLSLGASRYEALTPYIRKCLRSALKPTLANIATAGLVFLPGMMTGQILGGASPMLAIKYQISIMIALYVSTSMSTAFS
IFSTIHTTFDEYGLVKKEIYREKRKRK

Sequences:

>Translated_267_residues
MASPDISITSLLLCFLLLIIPLAISYRIKLRISRATIDAVSRMTVQLVMAGVFLTYVFDLNNGALNMAWVLGMVVIASYT
TIKNVELKMEKLLLPVVLSFMAANISVLLYFNEFVLDLGNLLEARYLIPVGGMILGNSLRGNIVGMGEFYEDIRRNENRY
LYNLSLGASRYEALTPYIRKCLRSALKPTLANIATAGLVFLPGMMTGQILGGASPMLAIKYQISIMIALYVSTSMSTAFS
IFSTIHTTFDEYGLVKKEIYREKRKRK
>Mature_266_residues
ASPDISITSLLLCFLLLIIPLAISYRIKLRISRATIDAVSRMTVQLVMAGVFLTYVFDLNNGALNMAWVLGMVVIASYTT
IKNVELKMEKLLLPVVLSFMAANISVLLYFNEFVLDLGNLLEARYLIPVGGMILGNSLRGNIVGMGEFYEDIRRNENRYL
YNLSLGASRYEALTPYIRKCLRSALKPTLANIATAGLVFLPGMMTGQILGGASPMLAIKYQISIMIALYVSTSMSTAFSI
FSTIHTTFDEYGLVKKEIYREKRKRK

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=248, Percent_Identity=30.241935483871, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 29785; Mature: 29654

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPDISITSLLLCFLLLIIPLAISYRIKLRISRATIDAVSRMTVQLVMAGVFLTYVFDL
CCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
NNGALNMAWVLGMVVIASYTTIKNVELKMEKLLLPVVLSFMAANISVLLYFNEFVLDLGN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHH
LLEARYLIPVGGMILGNSLRGNIVGMGEFYEDIRRNENRYLYNLSLGASRYEALTPYIRK
HHHHHHHEEECCEEECCCCCCCEEECHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
CLRSALKPTLANIATAGLVFLPGMMTGQILGGASPMLAIKYQISIMIALYVSTSMSTAFS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEHHHHHEEHHHHHHHHHHHH
IFSTIHTTFDEYGLVKKEIYREKRKRK
HHHHHHHHHHHHCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASPDISITSLLLCFLLLIIPLAISYRIKLRISRATIDAVSRMTVQLVMAGVFLTYVFDL
CCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
NNGALNMAWVLGMVVIASYTTIKNVELKMEKLLLPVVLSFMAANISVLLYFNEFVLDLGN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHH
LLEARYLIPVGGMILGNSLRGNIVGMGEFYEDIRRNENRYLYNLSLGASRYEALTPYIRK
HHHHHHHEEECCEEECCCCCCCEEECHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
CLRSALKPTLANIATAGLVFLPGMMTGQILGGASPMLAIKYQISIMIALYVSTSMSTAFS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEHHHHHEEHHHHHHHHHHHH
IFSTIHTTFDEYGLVKKEIYREKRKRK
HHHHHHHHHHHHCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]