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The map label for this gene is 21228179

Identifier: 21228179

GI number: 21228179

Start: 2477548

End: 2478291

Strand: Reverse

Name: 21228179

Synonym: MM_2077

Alternate gene names: NA

Gene position: 2478291-2477548 (Counterclockwise)

Preceding gene: 21228182

Following gene: 21228178

Centisome position: 60.5

GC content: 45.3

Gene sequence:

>744_bases
ATGCTTAAGCAGAGATTTGTGCTGGACACAACGGCACTGACGGATCTGCAGACCAGGGAGGTTATGGGTTATACATCCCT
CTGTGAAGGGATGAAAACGATACTCGACCTTATAGCCGAAGCCCGCCTGCATTTCGGGATAAGCTGTTATGTCCCTTATC
CATCGGTATACAAAGAGATGTACGAATTTGCAAGCCGTAACGGTTGCGACAGAGAGGTAGTTGCGAAGATAGATACCTGG
CTCGTAAAAAAATCTCCTGACCGATATAGAGTGGATGTAACCTCACAGATTTTCCATGAATACGTCTCTTACATGAGAGA
AAGGATTAACCGCGGGATGGGAGTTGCGGAAGATGCAATATGGGAAGCTGCAACCGAATGTCTCTTTATGGAAAATCCGC
AAAATAAGAAAAAAGAGTACAGGGAAGAGGTTGAAAGAGAGGTTATAGGGGGAATAATCGGCAAATTCAGGAACAAGTAC
AGAGCAGCTCTGAGATACGGGATTCTTGACAGTGCTCCGGATATTGATGTCCTGATCCTTGCAAAAGAACTTGATGCTGC
AGTCATAGCAAGTGACTATGGAATTGAAAAATGGGCAGAGCAGCTCGGAGTACGCTTCGTGCCTGCAAACACCTTCCCAA
TGATGATTAAAGAATACCTCAGGCACGGCCCGGAAGTTGTAAAAGAACAGGAGGACGAGGATAGAAAGAGAATTGATTAT
TCGGATGACGCGGACTTCATTTAA

Upstream 100 bases:

>100_bases
CATTTAGATCAAATAAAGCGAATTAGCGTAAAACAAAGAATTTTATTGCCCCTTGATCAATATATAAGAAGGGTAAAAGA
TAATAAAAGGACTCGAAAAA

Downstream 100 bases:

>100_bases
CAGGCACTAAAAGGATTTGTCAGGCTCTGGTAATCAGGCATGAAGCCTGGCTGGGCAGCTGCTAGCCAGAGGTACGTTAT
TAACATGTTTGTCTTTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLKQRFVLDTTALTDLQTREVMGYTSLCEGMKTILDLIAEARLHFGISCYVPYPSVYKEMYEFASRNGCDREVVAKIDTW
LVKKSPDRYRVDVTSQIFHEYVSYMRERINRGMGVAEDAIWEAATECLFMENPQNKKKEYREEVEREVIGGIIGKFRNKY
RAALRYGILDSAPDIDVLILAKELDAAVIASDYGIEKWAEQLGVRFVPANTFPMMIKEYLRHGPEVVKEQEDEDRKRIDY
SDDADFI

Sequences:

>Translated_247_residues
MLKQRFVLDTTALTDLQTREVMGYTSLCEGMKTILDLIAEARLHFGISCYVPYPSVYKEMYEFASRNGCDREVVAKIDTW
LVKKSPDRYRVDVTSQIFHEYVSYMRERINRGMGVAEDAIWEAATECLFMENPQNKKKEYREEVEREVIGGIIGKFRNKY
RAALRYGILDSAPDIDVLILAKELDAAVIASDYGIEKWAEQLGVRFVPANTFPMMIKEYLRHGPEVVKEQEDEDRKRIDY
SDDADFI
>Mature_247_residues
MLKQRFVLDTTALTDLQTREVMGYTSLCEGMKTILDLIAEARLHFGISCYVPYPSVYKEMYEFASRNGCDREVVAKIDTW
LVKKSPDRYRVDVTSQIFHEYVSYMRERINRGMGVAEDAIWEAATECLFMENPQNKKKEYREEVEREVIGGIIGKFRNKY
RAALRYGILDSAPDIDVLILAKELDAAVIASDYGIEKWAEQLGVRFVPANTFPMMIKEYLRHGPEVVKEQEDEDRKRIDY
SDDADFI

Specific function: Unknown

COG id: COG1458

COG function: function code R; Predicted DNA-binding protein containing PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0278 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2077_METMA (Q8PV94)

Other databases:

- EMBL:   AE008384
- RefSeq:   NP_634101.1
- GeneID:   1480419
- GenomeReviews:   AE008384_GR
- KEGG:   mma:MM_2077
- NMPDR:   fig|192952.1.peg.2077
- HOGENOM:   HBG507856
- OMA:   KTPNRYE
- ProtClustDB:   PRK04358
- BioCyc:   MMAZ192952:MM2077-MONOMER
- HAMAP:   MF_01078
- InterPro:   IPR014856
- InterPro:   IPR022785
- TIGRFAMs:   TIGR03875

Pfam domain/function: PF08745 UPF0278

EC number: NA

Molecular weight: Translated: 28672; Mature: 28672

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQRFVLDTTALTDLQTREVMGYTSLCEGMKTILDLIAEARLHFGISCYVPYPSVYKEM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHH
YEFASRNGCDREVVAKIDTWLVKKSPDRYRVDVTSQIFHEYVSYMRERINRGMGVAEDAI
HHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHH
WEAATECLFMENPQNKKKEYREEVEREVIGGIIGKFRNKYRAALRYGILDSAPDIDVLIL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
AKELDAAVIASDYGIEKWAEQLGVRFVPANTFPMMIKEYLRHGPEVVKEQEDEDRKRIDY
EHHHCHHHHHHHCCHHHHHHHHCCEEECCCCHHHHHHHHHHCCHHHHHCCCCHHHHCCCC
SDDADFI
CCCCCCC
>Mature Secondary Structure
MLKQRFVLDTTALTDLQTREVMGYTSLCEGMKTILDLIAEARLHFGISCYVPYPSVYKEM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHH
YEFASRNGCDREVVAKIDTWLVKKSPDRYRVDVTSQIFHEYVSYMRERINRGMGVAEDAI
HHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHH
WEAATECLFMENPQNKKKEYREEVEREVIGGIIGKFRNKYRAALRYGILDSAPDIDVLIL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
AKELDAAVIASDYGIEKWAEQLGVRFVPANTFPMMIKEYLRHGPEVVKEQEDEDRKRIDY
EHHHCHHHHHHHCCHHHHHHHHCCEEECCCCHHHHHHHHHHCCHHHHHCCCCHHHHCCCC
SDDADFI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824