Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228167

Identifier: 21228167

GI number: 21228167

Start: 2459679

End: 2460920

Strand: Direct

Name: 21228167

Synonym: MM_2065

Alternate gene names: NA

Gene position: 2459679-2460920 (Clockwise)

Preceding gene: 21228166

Following gene: 21228168

Centisome position: 60.05

GC content: 44.2

Gene sequence:

>1242_bases
TTGAAAAATACTGATAACTCTGGAAAGATACAAACATTCAATGGTACAAAAGTAAATGCAGAAGATATCAGGGAGTCTTC
CGCTTATTCTACAGTTTTCGACGCCCTCTTTTTGCTTGTTTTAATCTCACTTTCCGGTATTATCCTTATGCCCTCTTTGC
AGGCTGATGAACAGTATGCTGCAGCTTCGTACGTAACTTCTTCAGAACTGGATACCTATCTGCTTGAGTCTCTCCTTTCC
TGCAAGCTTGAAGATTTTGAATACGAGATCTCACCTCTTTCGGTAGTTAACGTTTCAGTCCCGAAAAACTCAATTGTAGC
GGACCCTGCTCACACCCTTTTCGGAAAGGAACTGAAGCACAGGACTTTTGCCGACCTTACAGCCGAATATCTGGCTATTT
CCCTCAGGCTGCAGGGAAAAGGCTCTTCTGTCCCCCTCAATCCTCTTTCTGAAGGTTATTCCGACCAGGCTTCCGAAACC
ATAACTGCCTATCTGGACAGAAAGGCAGCAGGGAGATTTTCATATCGGTTTGAAGCTTACTGGTATCCTCTGGAAGCTTT
CCCTATGGGAAGTGAACTTATAATCGGCGAAGAACCTCCTGTTGATGCCATACGGCAGAGTGCAAAAATTTCCATGCCTC
TTTATGCGGCAGCACCCTCCAGAGATTCCCTTCTTGCCTGCGTGAATGATTCCGTCCTTGAAGCTTCTCTTAACGCTTCT
GACGGAGAGGCTTCAGCAGCACTTTTCCAGGCTTTTAATGCTTCTCTTGATGCTGCAGCCCTTGAAGGAGCTGAAACAGC
AGCTGAGCTTCTTTTCCCCTCGGATTATTCAGGATCGGTTTTTGGAGAGGAAGCGGATGAGTCTTTTGAGACGCTACTTT
ACGGGGTTTCTGAATATTCGGATGGAGAAAACTCTTCCTCAACAGAAGAAGAATTTAACGCTTATCTTTATGATCTGTTT
AATACAGGATTTGCACCCAATTTCGAAAATTTTTCTGAAAATATATCTACTGCAGAACTTTCTCAACTTGAGGTCCTGCT
TGTAGATCATATAAGAGCAGATATTCGAACAGAACTGGAGGCTGAGTTTTCAGGTGAGATTAATGAAACTGTTTATGCTG
TAGCTGAGGTCAAAGATCTCTCCGAGGCTCGGGTTCTGAGGGATTCTCAGATAGATGCAATTTACAGGCAGATCAATCCC
GGAGGGGCGAGGATAGTCCTCTATCTCTGGAAACCATATTAA

Upstream 100 bases:

>100_bases
TGCAATGAGTCCGGAGCTTATCAAATGCAGGAATTGAAGTTCCCTGAAAAACATCCGATTCAGGAAAGAAATAGTCAAAT
AATTGAAAGAGGCGAACTCT

Downstream 100 bases:

>100_bases
CCATTTAAAATGCCATGTGTGGCCTAACTTAAACCATTTAAATGCCTTATGTGGTCTTATCCTGAAATTCCGACACAAAG
TATATATCATATGGTGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKNTDNSGKIQTFNGTKVNAEDIRESSAYSTVFDALFLLVLISLSGIILMPSLQADEQYAAASYVTSSELDTYLLESLLS
CKLEDFEYEISPLSVVNVSVPKNSIVADPAHTLFGKELKHRTFADLTAEYLAISLRLQGKGSSVPLNPLSEGYSDQASET
ITAYLDRKAAGRFSYRFEAYWYPLEAFPMGSELIIGEEPPVDAIRQSAKISMPLYAAAPSRDSLLACVNDSVLEASLNAS
DGEASAALFQAFNASLDAAALEGAETAAELLFPSDYSGSVFGEEADESFETLLYGVSEYSDGENSSSTEEEFNAYLYDLF
NTGFAPNFENFSENISTAELSQLEVLLVDHIRADIRTELEAEFSGEINETVYAVAEVKDLSEARVLRDSQIDAIYRQINP
GGARIVLYLWKPY

Sequences:

>Translated_413_residues
MKNTDNSGKIQTFNGTKVNAEDIRESSAYSTVFDALFLLVLISLSGIILMPSLQADEQYAAASYVTSSELDTYLLESLLS
CKLEDFEYEISPLSVVNVSVPKNSIVADPAHTLFGKELKHRTFADLTAEYLAISLRLQGKGSSVPLNPLSEGYSDQASET
ITAYLDRKAAGRFSYRFEAYWYPLEAFPMGSELIIGEEPPVDAIRQSAKISMPLYAAAPSRDSLLACVNDSVLEASLNAS
DGEASAALFQAFNASLDAAALEGAETAAELLFPSDYSGSVFGEEADESFETLLYGVSEYSDGENSSSTEEEFNAYLYDLF
NTGFAPNFENFSENISTAELSQLEVLLVDHIRADIRTELEAEFSGEINETVYAVAEVKDLSEARVLRDSQIDAIYRQINP
GGARIVLYLWKPY
>Mature_413_residues
MKNTDNSGKIQTFNGTKVNAEDIRESSAYSTVFDALFLLVLISLSGIILMPSLQADEQYAAASYVTSSELDTYLLESLLS
CKLEDFEYEISPLSVVNVSVPKNSIVADPAHTLFGKELKHRTFADLTAEYLAISLRLQGKGSSVPLNPLSEGYSDQASET
ITAYLDRKAAGRFSYRFEAYWYPLEAFPMGSELIIGEEPPVDAIRQSAKISMPLYAAAPSRDSLLACVNDSVLEASLNAS
DGEASAALFQAFNASLDAAALEGAETAAELLFPSDYSGSVFGEEADESFETLLYGVSEYSDGENSSSTEEEFNAYLYDLF
NTGFAPNFENFSENISTAELSQLEVLLVDHIRADIRTELEAEFSGEINETVYAVAEVKDLSEARVLRDSQIDAIYRQINP
GGARIVLYLWKPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45243; Mature: 45243

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTDNSGKIQTFNGTKVNAEDIRESSAYSTVFDALFLLVLISLSGIILMPSLQADEQYA
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHH
AASYVTSSELDTYLLESLLSCKLEDFEYEISPLSVVNVSVPKNSIVADPAHTLFGKELKH
HHHHHHHHHHHHHHHHHHHHCCHHCCEEEECCEEEEEEECCCCCEECCCHHHHHHHHHHH
RTFADLTAEYLAISLRLQGKGSSVPLNPLSEGYSDQASETITAYLDRKAAGRFSYRFEAY
HHHHHHHHEEEEEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEE
WYPLEAFPMGSELIIGEEPPVDAIRQSAKISMPLYAAAPSRDSLLACVNDSVLEASLNAS
EEEHHHCCCCCEEEECCCCCHHHHHHCCCCCCCEEEECCCCCCEEEECCCHHHEEECCCC
DGEASAALFQAFNASLDAAALEGAETAAELLFPSDYSGSVFGEEADESFETLLYGVSEYS
CCHHHHHHHHHHCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
DGENSSSTEEEFNAYLYDLFNTGFAPNFENFSENISTAELSQLEVLLVDHIRADIRTELE
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEFSGEINETVYAVAEVKDLSEARVLRDSQIDAIYRQINPGGARIVLYLWKPY
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
>Mature Secondary Structure
MKNTDNSGKIQTFNGTKVNAEDIRESSAYSTVFDALFLLVLISLSGIILMPSLQADEQYA
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHH
AASYVTSSELDTYLLESLLSCKLEDFEYEISPLSVVNVSVPKNSIVADPAHTLFGKELKH
HHHHHHHHHHHHHHHHHHHHCCHHCCEEEECCEEEEEEECCCCCEECCCHHHHHHHHHHH
RTFADLTAEYLAISLRLQGKGSSVPLNPLSEGYSDQASETITAYLDRKAAGRFSYRFEAY
HHHHHHHHEEEEEEEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEE
WYPLEAFPMGSELIIGEEPPVDAIRQSAKISMPLYAAAPSRDSLLACVNDSVLEASLNAS
EEEHHHCCCCCEEEECCCCCHHHHHHCCCCCCCEEEECCCCCCEEEECCCHHHEEECCCC
DGEASAALFQAFNASLDAAALEGAETAAELLFPSDYSGSVFGEEADESFETLLYGVSEYS
CCHHHHHHHHHHCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
DGENSSSTEEEFNAYLYDLFNTGFAPNFENFSENISTAELSQLEVLLVDHIRADIRTELE
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEFSGEINETVYAVAEVKDLSEARVLRDSQIDAIYRQINPGGARIVLYLWKPY
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA