Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228164

Identifier: 21228164

GI number: 21228164

Start: 2457786

End: 2458403

Strand: Direct

Name: 21228164

Synonym: MM_2062

Alternate gene names: NA

Gene position: 2457786-2458403 (Clockwise)

Preceding gene: 21228163

Following gene: 21228165

Centisome position: 60.0

GC content: 45.47

Gene sequence:

>618_bases
TTGTTTCTAGTAAAAGTAATCTTTTTATATACAAACTGTGTAATTTTTGTTATAATTAATTACTTAGTTTTTTTACAATC
CGGATTTCTGGGGGGAATTACGGCGGGAAAAGCGAGAGTATTAGCATGTCAGATAGCATGTCAGATCGGAGCTGAGGAGT
CCGCAGTTTGTGGGCTTCCCTTCAGGCTCACGGTTACAGGAACTCTTTTTGCTGTACTCCTGCTGATCTCTTCTGTCTCT
GTCTCCGGCTTTCTGGAAGGAGTAGAGGAGCGGGAAACCATGGGTGAGGTTTCAAAAGTAATAGCTGCTGCCGAACAGCT
CTCCATACGCGGAGAAGGCAGTGAGCTTGCCCTTGAAATAAACGTACCTCAGAGGGCATCGGTCATTTTTGGGGCTTTGC
CGGGACAGGAAGGCAACTGGCCTGAGGATGCGGATAACTATGGCATCACTGTTGAAGGAAAATCAAAAATTTATCCCGAA
GCTGCTTCTTTTTCGAACTCTGAGCTAAACGGGCCCGTATCTTTTGGTCCGGGCAGACACAGGTTGCTTCTTATTACAAA
AATTGATTCGGAATCAGGCAGGCTTTTTGTCCTGATATCCGAAACAGGGGCTGATTGA

Upstream 100 bases:

>100_bases
TATTTTTCTCTTCTCTCTTTCCTCGTAGATTTTTTATTCTCACATACTATCAGTTTGTAAACTATATCTTATTCCTCTAA
ATTTTATTTATCAAATCGCA

Downstream 100 bases:

>100_bases
GAAGATGAAATCGGGAAAGACCTGCACAATAAAAGAGTTTCCAGCAGATGAGTCTGCATGGGCTGACTTTTTAATCTCAA
AAGCTGCACTGGTTCTATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MFLVKVIFLYTNCVIFVIINYLVFLQSGFLGGITAGKARVLACQIACQIGAEESAVCGLPFRLTVTGTLFAVLLLISSVS
VSGFLEGVEERETMGEVSKVIAAAEQLSIRGEGSELALEINVPQRASVIFGALPGQEGNWPEDADNYGITVEGKSKIYPE
AASFSNSELNGPVSFGPGRHRLLLITKIDSESGRLFVLISETGAD

Sequences:

>Translated_205_residues
MFLVKVIFLYTNCVIFVIINYLVFLQSGFLGGITAGKARVLACQIACQIGAEESAVCGLPFRLTVTGTLFAVLLLISSVS
VSGFLEGVEERETMGEVSKVIAAAEQLSIRGEGSELALEINVPQRASVIFGALPGQEGNWPEDADNYGITVEGKSKIYPE
AASFSNSELNGPVSFGPGRHRLLLITKIDSESGRLFVLISETGAD
>Mature_205_residues
MFLVKVIFLYTNCVIFVIINYLVFLQSGFLGGITAGKARVLACQIACQIGAEESAVCGLPFRLTVTGTLFAVLLLISSVS
VSGFLEGVEERETMGEVSKVIAAAEQLSIRGEGSELALEINVPQRASVIFGALPGQEGNWPEDADNYGITVEGKSKIYPE
AASFSNSELNGPVSFGPGRHRLLLITKIDSESGRLFVLISETGAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21836; Mature: 21836

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLVKVIFLYTNCVIFVIINYLVFLQSGFLGGITAGKARVLACQIACQIGAEESAVCGLP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCC
FRLTVTGTLFAVLLLISSVSVSGFLEGVEERETMGEVSKVIAAAEQLSIRGEGSELALEI
EEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEE
NVPQRASVIFGALPGQEGNWPEDADNYGITVEGKSKIYPEAASFSNSELNGPVSFGPGRH
CCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCE
RLLLITKIDSESGRLFVLISETGAD
EEEEEEEECCCCCEEEEEEECCCCC
>Mature Secondary Structure
MFLVKVIFLYTNCVIFVIINYLVFLQSGFLGGITAGKARVLACQIACQIGAEESAVCGLP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCC
FRLTVTGTLFAVLLLISSVSVSGFLEGVEERETMGEVSKVIAAAEQLSIRGEGSELALEI
EEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEE
NVPQRASVIFGALPGQEGNWPEDADNYGITVEGKSKIYPEAASFSNSELNGPVSFGPGRH
CCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCE
RLLLITKIDSESGRLFVLISETGAD
EEEEEEEECCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA