| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228160
Identifier: 21228160
GI number: 21228160
Start: 2452501
End: 2453043
Strand: Reverse
Name: 21228160
Synonym: MM_2058
Alternate gene names: NA
Gene position: 2453043-2452501 (Counterclockwise)
Preceding gene: 21228161
Following gene: 21228159
Centisome position: 59.88
GC content: 45.49
Gene sequence:
>543_bases TTGAAGTTATCAGATATTGAGGAAAGAGACCTTAAAAAAGGGCAGCCTGAAAATATAGAGGAAAAAGCTACCATTGATAT CCTTGATGTCCTGGCTGAAGAGGGCATAAGTGTCCAGGACCTTGCAGATACGGCTCTCGAAATGTATGTCCCTCACCCTG GACTTGAGACAAGGGAAAAAGCTGAAGCTCTGTTTAAAAGAGAACTCAAATTCGCTCTTTCTGACCCCAATCTCTGCCTT TTGATTTACACAGGGGTCCTGCTTGAGAGAGAGGGAAAAGCCGGAAACCTTCCTAACCTCAGCAAAAAGTCTTACGAAAA AGACCTGACGTTTATAATTGCGGACGAAGTGCTCGGCACAAGCATAGCAACCTACATCAGCGGCTCCAAAGGTGCATTCG AGTTCGTCAGGTACGATAAGCAAAAACCCGGGATTCTTGCAAACCTGGGACCTTTTATGGACGATGTCATAGGAGGCCTC ATAGGAGGGGTGTCCTCCAATATGTATTCAAGAGGGATGGCAGAGTTTGAAAGAAAAGACTGA
Upstream 100 bases:
>100_bases GCCCGGATTTTTGTTTTAAGCTTAACTGTATTAAGAACAACCGTTTTAAGAATTTAAAAACCCCTGAAATAACCGTTTTG ACAACCCCGGAGTGATCAGT
Downstream 100 bases:
>100_bases AAAACAGGCGGTACATAATGAATTCATATTTACTTGCATTTAAGTCAGGTTTTGGTTTTCTGTCCACGATCCCTGTAGGA ATTACTATGGAAGGGATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKLSDIEERDLKKGQPENIEEKATIDILDVLAEEGISVQDLADTALEMYVPHPGLETREKAEALFKRELKFALSDPNLCL LIYTGVLLEREGKAGNLPNLSKKSYEKDLTFIIADEVLGTSIATYISGSKGAFEFVRYDKQKPGILANLGPFMDDVIGGL IGGVSSNMYSRGMAEFERKD
Sequences:
>Translated_180_residues MKLSDIEERDLKKGQPENIEEKATIDILDVLAEEGISVQDLADTALEMYVPHPGLETREKAEALFKRELKFALSDPNLCL LIYTGVLLEREGKAGNLPNLSKKSYEKDLTFIIADEVLGTSIATYISGSKGAFEFVRYDKQKPGILANLGPFMDDVIGGL IGGVSSNMYSRGMAEFERKD >Mature_180_residues MKLSDIEERDLKKGQPENIEEKATIDILDVLAEEGISVQDLADTALEMYVPHPGLETREKAEALFKRELKFALSDPNLCL LIYTGVLLEREGKAGNLPNLSKKSYEKDLTFIIADEVLGTSIATYISGSKGAFEFVRYDKQKPGILANLGPFMDDVIGGL IGGVSSNMYSRGMAEFERKD
Specific function: Unknown
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: NA
Molecular weight: Translated: 19894; Mature: 19894
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSDIEERDLKKGQPENIEEKATIDILDVLAEEGISVQDLADTALEMYVPHPGLETREK CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHH AEALFKRELKFALSDPNLCLLIYTGVLLEREGKAGNLPNLSKKSYEKDLTFIIADEVLGT HHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCCCCHHHHHCCHHEEEHHHHHHH SIATYISGSKGAFEFVRYDKQKPGILANLGPFMDDVIGGLIGGVSSNMYSRGMAEFERKD HHHHHHCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLSDIEERDLKKGQPENIEEKATIDILDVLAEEGISVQDLADTALEMYVPHPGLETREK CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHH AEALFKRELKFALSDPNLCLLIYTGVLLEREGKAGNLPNLSKKSYEKDLTFIIADEVLGT HHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCCCCHHHHHCCHHEEEHHHHHHH SIATYISGSKGAFEFVRYDKQKPGILANLGPFMDDVIGGLIGGVSSNMYSRGMAEFERKD HHHHHHCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]