| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228126
Identifier: 21228126
GI number: 21228126
Start: 2416103
End: 2416585
Strand: Reverse
Name: 21228126
Synonym: MM_2024
Alternate gene names: NA
Gene position: 2416585-2416103 (Counterclockwise)
Preceding gene: 21228129
Following gene: 21228125
Centisome position: 58.99
GC content: 42.44
Gene sequence:
>483_bases ATGGGAATTCAACTATTCAGACATAATGAAAAAGCAATGGAATTACCGATTAACATCGTTGTGATGCTCGTTGTGGCAAT GGTCGCTCTTGCAACCCTTATTTCGATAATACCGACTCCTACAAAGGAAATGTCAGTTTTTGTGGAAAGCACAGGACCTG CGCCAGGAGACCTTCAGACAGGGAATTCAATAATAGTAAGTTCTACAACTGCGCAAAACCCGTTCACAGTATCATCAGAA GTAAGAGTCACTGATAAAGACGGAAACCCGGTTAGAAATGCAAACGTCATCCTTAAAGGACTTGGTGGTGTGGCATCAAA CACAACTGACATTAACGGGGCTACTGTTTTGACAACGCCTGCAGGTGCGCTTGTGAGGCTTGACCCAAACCAGAATGAAG GTACAATGGACCTGAAAATCATAGCAGACGGTTTCTATGACTATGAGAAAAAAGATGCAATCATGATAGTAAAAACTCGC TAA
Upstream 100 bases:
>100_bases GCTTTGTCAACATATCGAAAAGTTATAAATAGAAAGATAGAATATTGATAGAATGTTGTAAAGTTGAAAAGTTCTCAGAA CTAAAGTGAGGGGGGAAATA
Downstream 100 bases:
>100_bases TAATTAACTTGCTAACAAACCTGATAAAATAAAATCTGGAGAAGCCGCATATGCTGCCGAAAGACCTGAAAAAGAACGAA ACCGGGACCGTTGGGCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MGIQLFRHNEKAMELPINIVVMLVVAMVALATLISIIPTPTKEMSVFVESTGPAPGDLQTGNSIIVSSTTAQNPFTVSSE VRVTDKDGNPVRNANVILKGLGGVASNTTDINGATVLTTPAGALVRLDPNQNEGTMDLKIIADGFYDYEKKDAIMIVKTR
Sequences:
>Translated_160_residues MGIQLFRHNEKAMELPINIVVMLVVAMVALATLISIIPTPTKEMSVFVESTGPAPGDLQTGNSIIVSSTTAQNPFTVSSE VRVTDKDGNPVRNANVILKGLGGVASNTTDINGATVLTTPAGALVRLDPNQNEGTMDLKIIADGFYDYEKKDAIMIVKTR >Mature_159_residues GIQLFRHNEKAMELPINIVVMLVVAMVALATLISIIPTPTKEMSVFVESTGPAPGDLQTGNSIIVSSTTAQNPFTVSSEV RVTDKDGNPVRNANVILKGLGGVASNTTDINGATVLTTPAGALVRLDPNQNEGTMDLKIIADGFYDYEKKDAIMIVKTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17014; Mature: 16883
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIQLFRHNEKAMELPINIVVMLVVAMVALATLISIIPTPTKEMSVFVESTGPAPGDLQT CCEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCC GNSIIVSSTTAQNPFTVSSEVRVTDKDGNPVRNANVILKGLGGVASNTTDINGATVLTTP CCEEEEEECCCCCCEEECCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEC AGALVRLDPNQNEGTMDLKIIADGFYDYEKKDAIMIVKTR CCEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEC >Mature Secondary Structure GIQLFRHNEKAMELPINIVVMLVVAMVALATLISIIPTPTKEMSVFVESTGPAPGDLQT CEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCC GNSIIVSSTTAQNPFTVSSEVRVTDKDGNPVRNANVILKGLGGVASNTTDINGATVLTTP CCEEEEEECCCCCCEEECCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEC AGALVRLDPNQNEGTMDLKIIADGFYDYEKKDAIMIVKTR CCEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA