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The map label for this gene is 21228120

Identifier: 21228120

GI number: 21228120

Start: 2408623

End: 2410602

Strand: Direct

Name: 21228120

Synonym: MM_2018

Alternate gene names: NA

Gene position: 2408623-2410602 (Clockwise)

Preceding gene: 21228113

Following gene: 21228121

Centisome position: 58.8

GC content: 44.65

Gene sequence:

>1980_bases
ATGAGTGGGATACGGCTTGGAAGAGATTCGTTTCATACCTATGAAGAAGGCATAAAAAGAGAATGGATTATAGGTAACGG
TATTGGTGGATACGCTTCATCTACGGTCATTGGAGCCGGGGCAAGGACTTACCATGGACTTCTTGTTGCGGCTCCTCCTG
ATTCCCCTGGCAGGGTTTTACTGCTCTCTTCCCTGGATGAAGAGATTTCCCTTAATGAAGAGATCTACCCGCTTGCAACC
CATAAATACCCGGGTACGGTTTATCCCGAAGGATTCACCTATCTTACCAAGTTTATTCTTGCACCTGCCCCTCTCTGGGT
CTACCAGCCCGGGGACTTCACTGTAAAAAAGAAAATTTTCATGGTACATAACAGTAATACTACATGTATCCTTTATGAGG
TCAGGTGCCGTAAAGAAGGTGCTTTGCTCAGGATCTCTCCCCTTGTCAACGCAAGAAGTTTTCACGGAACTACACGTTCC
GGAGACCTCTCTTTTTCCCAGAAAGCTGAAACTGACGGAACCAAACTGGAAAGCTCAAATGGTTTTACTTTCTGGCTTTC
ATCCAATCTCCAGTATCATGCTGACCCTAAGTGGTATTATAACTTTGAATATGATATAGAAAAAGATCGGGGGCTTGCGT
TCAGAGAGGATAATTTCAATCCAGGCTATTTCGAAAGCAAACTTAAAATGGGAACATCTTATTTCTTTATTGCCGCTTCA
ACTGAAAATATATCCTCTCTTACTCTTGAAAAAGCTGAAGAACTCTATACCAGGGAGGTTTATAGACAGAACCTTTTTGC
TTTTAATTCAAGGCTTACCGAACCTTTTGCCCTCAAACTTCTCAGAGCTACTGATCCTTTTATTGTAAAACACCCTCTGA
CCGGTGAAAAAACAATAATTGCAGGTTATCCCTGGTTCTCAGATTGGGGCAGGGATGTAATGATCTCTTTTCCAGGGCTT
GTTTTGATCCCCCGCCGTTTTGAGGATGCCAAATCCATCCTTAAAAATTTTTCCAGTAACTGCAGGCGAGGCCTGATTCC
CAATAATTTCCCGGCTTTCGGAGGAGAGCCTGTCTATAATACTGTAGATGCATCTCTCTGGTTTATTCATTCCCTGAGCC
GTTATTTTGCATATACGGAAGACCTGCTCTTCCTCTCGGATATCTGGGGAACTGTGGAAGATATAATAGATAATTATAGT
AAAGGCACGGATTTCGGGATTGGGATGGATTCTGATTATCTTATCAGGCAGGGCCCTCAGCTGACCTGGATGGATGCTAA
AGTAAACGACATCCCTGTAACTCCTAGAGCAGGTAAAGCCTGTGAAATCAATGCCCTGTGGTATAATGCTCTCAGGACTG
CTTGCAGACTGGGAGACCTGCTGGGGAGAGATACGTCTTCATACGAAACTCTTGCAGCCGGAGTAGCCTCCAATTTTGAA
AGAGTTTTCTGGAATCCTGAGAATAACTGTCTCCATGATATTGTGTCTGAAGATAAGGCTGGAAATCAGATTAAGGACTC
TTCAATTCGTCCAAACCAGATTTTTGCAGTCTCTCTACCCTACACAATGCTCTCCCCTGAAAAAGAGAAAGCTATTGTGG
ATAGAGTGGAGAAAGATTTGCTGACACCTTTCGGGCTCAGGACACTTTCATTGGACGATCCTTCTTACATAGGACTTTAC
AGGGGAGGGTCCGAAAGCAGGGACTCAGCTTACCACAACGGGACAGTCTGGCCATGGCTCCTTGGACCTTATGTTAAAGC
ATACAGGAAAGTGCATAACTATTCAAAAAAGAGCCTTGAGGATATGCGTGCTCTGCTTCAGGGATTTGATTCGCACCTTG
AGACCGCAGGCATAGGGACGATTTCAGAAGTGTTTGATGGCGACTTCCCCCACTCTCCTGGAGGCTGCATTGCCCAGGCA
TGGAGTGTTGCAGAAATTTTAAGGGCATATGTTGAGGATGTCCTGGGGATCAAACCTTAA

Upstream 100 bases:

>100_bases
TTATCTTAAAACTTATTATACCGTATGCTTCTTTCTCCGTTTAAACCCCTCCCTTCTAAATGTACAACTATATAAGAAAT
TAAATCCTAATCAGGTATGT

Downstream 100 bases:

>100_bases
AATAAGCTTTCATCACCTTTTTAAAATAGTTTTTCCGGTTTTTTACAAAACTCCATTTTTTCTATAAATCCATTTTTTCT
GTAATAGTGGACACTCCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Amylo-Alpha-16-Glucosidase; Glycogen Debranching Protein; Glycogen Debranching -Related Protein; Glycogen Debranching ; 4-Alpha-Glucanotransferase; Amylo-Alpha-1 6-Glucosidase; Glyen Debranching; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Archaeal Type; Glycogen Debranching Isoform 1 Related Protein; Neutral Invertase; Amylo-1 6-Glucosidase; AmylO-Alpha-16-Glucosidase; Glycogen Debranching Family Protein; Glycogen Debranching /Alpha-Amylase

Number of amino acids: Translated: 659; Mature: 658

Protein sequence:

>659_residues
MSGIRLGRDSFHTYEEGIKREWIIGNGIGGYASSTVIGAGARTYHGLLVAAPPDSPGRVLLLSSLDEEISLNEEIYPLAT
HKYPGTVYPEGFTYLTKFILAPAPLWVYQPGDFTVKKKIFMVHNSNTTCILYEVRCRKEGALLRISPLVNARSFHGTTRS
GDLSFSQKAETDGTKLESSNGFTFWLSSNLQYHADPKWYYNFEYDIEKDRGLAFREDNFNPGYFESKLKMGTSYFFIAAS
TENISSLTLEKAEELYTREVYRQNLFAFNSRLTEPFALKLLRATDPFIVKHPLTGEKTIIAGYPWFSDWGRDVMISFPGL
VLIPRRFEDAKSILKNFSSNCRRGLIPNNFPAFGGEPVYNTVDASLWFIHSLSRYFAYTEDLLFLSDIWGTVEDIIDNYS
KGTDFGIGMDSDYLIRQGPQLTWMDAKVNDIPVTPRAGKACEINALWYNALRTACRLGDLLGRDTSSYETLAAGVASNFE
RVFWNPENNCLHDIVSEDKAGNQIKDSSIRPNQIFAVSLPYTMLSPEKEKAIVDRVEKDLLTPFGLRTLSLDDPSYIGLY
RGGSESRDSAYHNGTVWPWLLGPYVKAYRKVHNYSKKSLEDMRALLQGFDSHLETAGIGTISEVFDGDFPHSPGGCIAQA
WSVAEILRAYVEDVLGIKP

Sequences:

>Translated_659_residues
MSGIRLGRDSFHTYEEGIKREWIIGNGIGGYASSTVIGAGARTYHGLLVAAPPDSPGRVLLLSSLDEEISLNEEIYPLAT
HKYPGTVYPEGFTYLTKFILAPAPLWVYQPGDFTVKKKIFMVHNSNTTCILYEVRCRKEGALLRISPLVNARSFHGTTRS
GDLSFSQKAETDGTKLESSNGFTFWLSSNLQYHADPKWYYNFEYDIEKDRGLAFREDNFNPGYFESKLKMGTSYFFIAAS
TENISSLTLEKAEELYTREVYRQNLFAFNSRLTEPFALKLLRATDPFIVKHPLTGEKTIIAGYPWFSDWGRDVMISFPGL
VLIPRRFEDAKSILKNFSSNCRRGLIPNNFPAFGGEPVYNTVDASLWFIHSLSRYFAYTEDLLFLSDIWGTVEDIIDNYS
KGTDFGIGMDSDYLIRQGPQLTWMDAKVNDIPVTPRAGKACEINALWYNALRTACRLGDLLGRDTSSYETLAAGVASNFE
RVFWNPENNCLHDIVSEDKAGNQIKDSSIRPNQIFAVSLPYTMLSPEKEKAIVDRVEKDLLTPFGLRTLSLDDPSYIGLY
RGGSESRDSAYHNGTVWPWLLGPYVKAYRKVHNYSKKSLEDMRALLQGFDSHLETAGIGTISEVFDGDFPHSPGGCIAQA
WSVAEILRAYVEDVLGIKP
>Mature_658_residues
SGIRLGRDSFHTYEEGIKREWIIGNGIGGYASSTVIGAGARTYHGLLVAAPPDSPGRVLLLSSLDEEISLNEEIYPLATH
KYPGTVYPEGFTYLTKFILAPAPLWVYQPGDFTVKKKIFMVHNSNTTCILYEVRCRKEGALLRISPLVNARSFHGTTRSG
DLSFSQKAETDGTKLESSNGFTFWLSSNLQYHADPKWYYNFEYDIEKDRGLAFREDNFNPGYFESKLKMGTSYFFIAAST
ENISSLTLEKAEELYTREVYRQNLFAFNSRLTEPFALKLLRATDPFIVKHPLTGEKTIIAGYPWFSDWGRDVMISFPGLV
LIPRRFEDAKSILKNFSSNCRRGLIPNNFPAFGGEPVYNTVDASLWFIHSLSRYFAYTEDLLFLSDIWGTVEDIIDNYSK
GTDFGIGMDSDYLIRQGPQLTWMDAKVNDIPVTPRAGKACEINALWYNALRTACRLGDLLGRDTSSYETLAAGVASNFER
VFWNPENNCLHDIVSEDKAGNQIKDSSIRPNQIFAVSLPYTMLSPEKEKAIVDRVEKDLLTPFGLRTLSLDDPSYIGLYR
GGSESRDSAYHNGTVWPWLLGPYVKAYRKVHNYSKKSLEDMRALLQGFDSHLETAGIGTISEVFDGDFPHSPGGCIAQAW
SVAEILRAYVEDVLGIKP

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI116734860, Length=451, Percent_Identity=24.390243902439, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI116734857, Length=451, Percent_Identity=24.390243902439, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI116734851, Length=451, Percent_Identity=24.390243902439, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI116734847, Length=451, Percent_Identity=24.390243902439, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI116734853, Length=451, Percent_Identity=24.390243902439, Blast_Score=104, Evalue=3e-22,
Organism=Homo sapiens, GI116734849, Length=451, Percent_Identity=24.390243902439, Blast_Score=104, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17535489, Length=423, Percent_Identity=24.3498817966903, Blast_Score=99, Evalue=8e-21,
Organism=Saccharomyces cerevisiae, GI6325442, Length=436, Percent_Identity=27.2935779816514, Blast_Score=117, Evalue=6e-27,
Organism=Drosophila melanogaster, GI45551136, Length=439, Percent_Identity=24.1457858769932, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI281363922, Length=439, Percent_Identity=24.1457858769932, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28573598, Length=439, Percent_Identity=24.1457858769932, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI281363924, Length=439, Percent_Identity=24.1457858769932, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24656935, Length=439, Percent_Identity=24.1457858769932, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74179; Mature: 74048

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIRLGRDSFHTYEEGIKREWIIGNGIGGYASSTVIGAGARTYHGLLVAAPPDSPGRVL
CCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCHHHCCEEEECCCCCCCCEE
LLSSLDEEISLNEEIYPLATHKYPGTVYPEGFTYLTKFILAPAPLWVYQPGDFTVKKKIF
EEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEEE
MVHNSNTTCILYEVRCRKEGALLRISPLVNARSFHGTTRSGDLSFSQKAETDGTKLESSN
EEECCCCEEEEEEEEECCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCEEECCC
GFTFWLSSNLQYHADPKWYYNFEYDIEKDRGLAFREDNFNPGYFESKLKMGTSYFFIAAS
CEEEEEECCCEEECCCCEEEEEEEECCCCCCCEEECCCCCCCHHHHHHHCCCEEEEEEEC
TENISSLTLEKAEELYTREVYRQNLFAFNSRLTEPFALKLLRATDPFIVKHPLTGEKTII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCEEE
AGYPWFSDWGRDVMISFPGLVLIPRRFEDAKSILKNFSSNCRRGLIPNNFPAFGGEPVYN
ECCCCHHHCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
TVDASLWFIHSLSRYFAYTEDLLFLSDIWGTVEDIIDNYSKGTDFGIGMDSDYLIRQGPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCC
LTWMDAKVNDIPVTPRAGKACEINALWYNALRTACRLGDLLGRDTSSYETLAAGVASNFE
EEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCE
RVFWNPENNCLHDIVSEDKAGNQIKDSSIRPNQIFAVSLPYTMLSPEKEKAIVDRVEKDL
EEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHH
LTPFGLRTLSLDDPSYIGLYRGGSESRDSAYHNGTVWPWLLGPYVKAYRKVHNYSKKSLE
CCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DMRALLQGFDSHLETAGIGTISEVFDGDFPHSPGGCIAQAWSVAEILRAYVEDVLGIKP
HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SGIRLGRDSFHTYEEGIKREWIIGNGIGGYASSTVIGAGARTYHGLLVAAPPDSPGRVL
CCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCHHHCCEEEECCCCCCCCEE
LLSSLDEEISLNEEIYPLATHKYPGTVYPEGFTYLTKFILAPAPLWVYQPGDFTVKKKIF
EEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEEE
MVHNSNTTCILYEVRCRKEGALLRISPLVNARSFHGTTRSGDLSFSQKAETDGTKLESSN
EEECCCCEEEEEEEEECCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCEEECCC
GFTFWLSSNLQYHADPKWYYNFEYDIEKDRGLAFREDNFNPGYFESKLKMGTSYFFIAAS
CEEEEEECCCEEECCCCEEEEEEEECCCCCCCEEECCCCCCCHHHHHHHCCCEEEEEEEC
TENISSLTLEKAEELYTREVYRQNLFAFNSRLTEPFALKLLRATDPFIVKHPLTGEKTII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCEEE
AGYPWFSDWGRDVMISFPGLVLIPRRFEDAKSILKNFSSNCRRGLIPNNFPAFGGEPVYN
ECCCCHHHCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
TVDASLWFIHSLSRYFAYTEDLLFLSDIWGTVEDIIDNYSKGTDFGIGMDSDYLIRQGPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCC
LTWMDAKVNDIPVTPRAGKACEINALWYNALRTACRLGDLLGRDTSSYETLAAGVASNFE
EEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCE
RVFWNPENNCLHDIVSEDKAGNQIKDSSIRPNQIFAVSLPYTMLSPEKEKAIVDRVEKDL
EEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHH
LTPFGLRTLSLDDPSYIGLYRGGSESRDSAYHNGTVWPWLLGPYVKAYRKVHNYSKKSLE
CCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DMRALLQGFDSHLETAGIGTISEVFDGDFPHSPGGCIAQAWSVAEILRAYVEDVLGIKP
HHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA