| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is phoU [H]
Identifier: 21228112
GI number: 21228112
Start: 2395923
End: 2396582
Strand: Direct
Name: phoU [H]
Synonym: MM_2010
Alternate gene names: 21228112
Gene position: 2395923-2396582 (Clockwise)
Preceding gene: 21228111
Following gene: 21228113
Centisome position: 58.49
GC content: 42.12
Gene sequence:
>660_bases GTGATAACTATGGTCAGAGAACGATACCTTCAGCAGCTAGATCTGCTTAAAGAGTCCGTACTTTCCCTTGGGGAAATGTC TGAGCTGGTTTTTCGAGACTCAATGGAGGCTGTTATAAATCTTGACGTCGAGCTTGCCGGAAAGACTCTTGCTCTTGAGC CTGAAGTGGATAAACTCGAGGAAATAATAGAGGCTTCTGTTTTTGACCTGCTTGCACTTCAGCAGCCGATGGCAAGTGAT CTCAGGCTTGTCGTGTCAGCACTCAAGATCTCAGCAGACTTTAGGAGAATAGTCGGGCTTTCTATTAATATTGCCAAAAT TCCTGGAAAATTCGAAGGCGGCCACATAAAGCCACTTATAGATACGAAAAAAATGGCAGATATTGCAGCATATATGCTTG AAAATTCCCTTAAATCCTTTGAGACTCAGGATGCTGAGCTTGCAAAAGTGGCAGCATCCCGGGATGAAGAGGTGGATAAA CTCTTTTATGCAGTCTGGGTTGAATTGATAGAAATGATGGCAAAGGATACCAGCATTATTTCCAAAGCCACATATTTGCT TTTCCTTATTCGTTATATTGAAAGGATTTCAGATCACTGCTGTAATATCTGTGAAAGCGTTGTTTACCTTGCAACAGCTG AACGCATTAAACTGAACTGA
Upstream 100 bases:
>100_bases TTTTCCTTATGGGAGAACTTGTTGAGTTCGGTCAGACAAGGCAAATCTTCCACAGCCCCAGGGAAAAGAGCACTGAGGAT TACATCACTGGCAGGTTCGG
Downstream 100 bases:
>100_bases AAAGGGTTTTTTTCCCTATTTCTTTTTTTCTTCCCTGTTTCTTTTTTCTTCCCTGTTTCTTTTTTCTTCCCTTTTTCCTT TTTTACTTTTCGTTTCTGGC
Product: phosphate transporter PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MITMVRERYLQQLDLLKESVLSLGEMSELVFRDSMEAVINLDVELAGKTLALEPEVDKLEEIIEASVFDLLALQQPMASD LRLVVSALKISADFRRIVGLSINIAKIPGKFEGGHIKPLIDTKKMADIAAYMLENSLKSFETQDAELAKVAASRDEEVDK LFYAVWVELIEMMAKDTSIISKATYLLFLIRYIERISDHCCNICESVVYLATAERIKLN
Sequences:
>Translated_219_residues MITMVRERYLQQLDLLKESVLSLGEMSELVFRDSMEAVINLDVELAGKTLALEPEVDKLEEIIEASVFDLLALQQPMASD LRLVVSALKISADFRRIVGLSINIAKIPGKFEGGHIKPLIDTKKMADIAAYMLENSLKSFETQDAELAKVAASRDEEVDK LFYAVWVELIEMMAKDTSIISKATYLLFLIRYIERISDHCCNICESVVYLATAERIKLN >Mature_219_residues MITMVRERYLQQLDLLKESVLSLGEMSELVFRDSMEAVINLDVELAGKTLALEPEVDKLEEIIEASVFDLLALQQPMASD LRLVVSALKISADFRRIVGLSINIAKIPGKFEGGHIKPLIDTKKMADIAAYMLENSLKSFETQDAELAKVAASRDEEVDK LFYAVWVELIEMMAKDTSIISKATYLLFLIRYIERISDHCCNICESVVYLATAERIKLN
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=204, Percent_Identity=29.4117647058824, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 24694; Mature: 24694
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITMVRERYLQQLDLLKESVLSLGEMSELVFRDSMEAVINLDVELAGKTLALEPEVDKLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCCHHHHH EIIEASVFDLLALQQPMASDLRLVVSALKISADFRRIVGLSINIAKIPGKFEGGHIKPLI HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCH DTKKMADIAAYMLENSLKSFETQDAELAKVAASRDEEVDKLFYAVWVELIEMMAKDTSII HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SKATYLLFLIRYIERISDHCCNICESVVYLATAERIKLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MITMVRERYLQQLDLLKESVLSLGEMSELVFRDSMEAVINLDVELAGKTLALEPEVDKLE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCCHHHHH EIIEASVFDLLALQQPMASDLRLVVSALKISADFRRIVGLSINIAKIPGKFEGGHIKPLI HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCH DTKKMADIAAYMLENSLKSFETQDAELAKVAASRDEEVDKLFYAVWVELIEMMAKDTSII HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SKATYLLFLIRYIERISDHCCNICESVVYLATAERIKLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]