| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228103
Identifier: 21228103
GI number: 21228103
Start: 2384073
End: 2384666
Strand: Reverse
Name: 21228103
Synonym: MM_2001
Alternate gene names: NA
Gene position: 2384666-2384073 (Counterclockwise)
Preceding gene: 21228114
Following gene: 21228102
Centisome position: 58.21
GC content: 44.44
Gene sequence:
>594_bases ATGCCTTCAGGAAAAAAAGCCATTCCGGGATTAATATTCCTCCTCTTTGCAGTCCTGATGATACTGTACTTTCAAACAGC AACTGATGAGAAGATAATTTATGAGGAAAATTTTGAGGACAGATCCGGGATCGAAGGAGGCTTCCTCGGGTGCGAAGACA GCACACTTTATCTGGATACTCAAAACCCTGCACGGACCGGGGAAGGGGTATGGAATAAAAATATAAGCCTGTCTCCCGGA AAAATCTCATGGAACTGGGAAGGGCAGGATACGGATAACTTCAGCCTCTGGTTAAAGATCTCATTCAGTGACCACAAATC TATTTATTATGTTGCAGCAGGGAGCAGGAACCCACAGTCTGAAGGCGAATTTTACCGGGATGAGGAAAACAGGAGGCGTT TTTCTCCTTCTGTCGTAATCTCCGGAATCCCCATGGGTCTGGTTGAAAGAGATATCATTGCGGATTATACCGGTTATTGC GGTCCTGCTGAAAATATAAAGATTGTGAAAATGAGTGCAGGGTTTGTAGACAACAGCACAGATCACACGAACCTGTTGAA GATTTCAGACCTGAAAATCCACGGAAAAGCGTAA
Upstream 100 bases:
>100_bases TCCCAATTCGTAATCAAAATATTAAAAAAAGTATGAATATATTTGCAGAATTTAAGATTATTTAGAAATATTTATTACCT ACTAACAATGACTATTTTTT
Downstream 100 bases:
>100_bases TCAGTCAAAATAACCTGAAAACCAGATAGCCTGAAAACCAGAGGGATCTGAAAATGAAAAAAAGCAGTATAGCATTGATA CTATTATTTGCATTTATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPSGKKAIPGLIFLLFAVLMILYFQTATDEKIIYEENFEDRSGIEGGFLGCEDSTLYLDTQNPARTGEGVWNKNISLSPG KISWNWEGQDTDNFSLWLKISFSDHKSIYYVAAGSRNPQSEGEFYRDEENRRRFSPSVVISGIPMGLVERDIIADYTGYC GPAENIKIVKMSAGFVDNSTDHTNLLKISDLKIHGKA
Sequences:
>Translated_197_residues MPSGKKAIPGLIFLLFAVLMILYFQTATDEKIIYEENFEDRSGIEGGFLGCEDSTLYLDTQNPARTGEGVWNKNISLSPG KISWNWEGQDTDNFSLWLKISFSDHKSIYYVAAGSRNPQSEGEFYRDEENRRRFSPSVVISGIPMGLVERDIIADYTGYC GPAENIKIVKMSAGFVDNSTDHTNLLKISDLKIHGKA >Mature_196_residues PSGKKAIPGLIFLLFAVLMILYFQTATDEKIIYEENFEDRSGIEGGFLGCEDSTLYLDTQNPARTGEGVWNKNISLSPGK ISWNWEGQDTDNFSLWLKISFSDHKSIYYVAAGSRNPQSEGEFYRDEENRRRFSPSVVISGIPMGLVERDIIADYTGYCG PAENIKIVKMSAGFVDNSTDHTNLLKISDLKIHGKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22061; Mature: 21930
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGKKAIPGLIFLLFAVLMILYFQTATDEKIIYEENFEDRSGIEGGFLGCEDSTLYLDT CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEECCCCCEEEEEC QNPARTGEGVWNKNISLSPGKISWNWEGQDTDNFSLWLKISFSDHKSIYYVAAGSRNPQS CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCC EGEFYRDEENRRRFSPSVVISGIPMGLVERDIIADYTGYCGPAENIKIVKMSAGFVDNST CCCCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCC DHTNLLKISDLKIHGKA CCCEEEEEEEEEEECCC >Mature Secondary Structure PSGKKAIPGLIFLLFAVLMILYFQTATDEKIIYEENFEDRSGIEGGFLGCEDSTLYLDT CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEECCCCCEEEEEC QNPARTGEGVWNKNISLSPGKISWNWEGQDTDNFSLWLKISFSDHKSIYYVAAGSRNPQS CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCC EGEFYRDEENRRRFSPSVVISGIPMGLVERDIIADYTGYCGPAENIKIVKMSAGFVDNST CCCCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCC DHTNLLKISDLKIHGKA CCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA