Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21228103

Identifier: 21228103

GI number: 21228103

Start: 2384073

End: 2384666

Strand: Reverse

Name: 21228103

Synonym: MM_2001

Alternate gene names: NA

Gene position: 2384666-2384073 (Counterclockwise)

Preceding gene: 21228114

Following gene: 21228102

Centisome position: 58.21

GC content: 44.44

Gene sequence:

>594_bases
ATGCCTTCAGGAAAAAAAGCCATTCCGGGATTAATATTCCTCCTCTTTGCAGTCCTGATGATACTGTACTTTCAAACAGC
AACTGATGAGAAGATAATTTATGAGGAAAATTTTGAGGACAGATCCGGGATCGAAGGAGGCTTCCTCGGGTGCGAAGACA
GCACACTTTATCTGGATACTCAAAACCCTGCACGGACCGGGGAAGGGGTATGGAATAAAAATATAAGCCTGTCTCCCGGA
AAAATCTCATGGAACTGGGAAGGGCAGGATACGGATAACTTCAGCCTCTGGTTAAAGATCTCATTCAGTGACCACAAATC
TATTTATTATGTTGCAGCAGGGAGCAGGAACCCACAGTCTGAAGGCGAATTTTACCGGGATGAGGAAAACAGGAGGCGTT
TTTCTCCTTCTGTCGTAATCTCCGGAATCCCCATGGGTCTGGTTGAAAGAGATATCATTGCGGATTATACCGGTTATTGC
GGTCCTGCTGAAAATATAAAGATTGTGAAAATGAGTGCAGGGTTTGTAGACAACAGCACAGATCACACGAACCTGTTGAA
GATTTCAGACCTGAAAATCCACGGAAAAGCGTAA

Upstream 100 bases:

>100_bases
TCCCAATTCGTAATCAAAATATTAAAAAAAGTATGAATATATTTGCAGAATTTAAGATTATTTAGAAATATTTATTACCT
ACTAACAATGACTATTTTTT

Downstream 100 bases:

>100_bases
TCAGTCAAAATAACCTGAAAACCAGATAGCCTGAAAACCAGAGGGATCTGAAAATGAAAAAAAGCAGTATAGCATTGATA
CTATTATTTGCATTTATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MPSGKKAIPGLIFLLFAVLMILYFQTATDEKIIYEENFEDRSGIEGGFLGCEDSTLYLDTQNPARTGEGVWNKNISLSPG
KISWNWEGQDTDNFSLWLKISFSDHKSIYYVAAGSRNPQSEGEFYRDEENRRRFSPSVVISGIPMGLVERDIIADYTGYC
GPAENIKIVKMSAGFVDNSTDHTNLLKISDLKIHGKA

Sequences:

>Translated_197_residues
MPSGKKAIPGLIFLLFAVLMILYFQTATDEKIIYEENFEDRSGIEGGFLGCEDSTLYLDTQNPARTGEGVWNKNISLSPG
KISWNWEGQDTDNFSLWLKISFSDHKSIYYVAAGSRNPQSEGEFYRDEENRRRFSPSVVISGIPMGLVERDIIADYTGYC
GPAENIKIVKMSAGFVDNSTDHTNLLKISDLKIHGKA
>Mature_196_residues
PSGKKAIPGLIFLLFAVLMILYFQTATDEKIIYEENFEDRSGIEGGFLGCEDSTLYLDTQNPARTGEGVWNKNISLSPGK
ISWNWEGQDTDNFSLWLKISFSDHKSIYYVAAGSRNPQSEGEFYRDEENRRRFSPSVVISGIPMGLVERDIIADYTGYCG
PAENIKIVKMSAGFVDNSTDHTNLLKISDLKIHGKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22061; Mature: 21930

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSGKKAIPGLIFLLFAVLMILYFQTATDEKIIYEENFEDRSGIEGGFLGCEDSTLYLDT
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEECCCCCEEEEEC
QNPARTGEGVWNKNISLSPGKISWNWEGQDTDNFSLWLKISFSDHKSIYYVAAGSRNPQS
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCC
EGEFYRDEENRRRFSPSVVISGIPMGLVERDIIADYTGYCGPAENIKIVKMSAGFVDNST
CCCCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCC
DHTNLLKISDLKIHGKA
CCCEEEEEEEEEEECCC
>Mature Secondary Structure 
PSGKKAIPGLIFLLFAVLMILYFQTATDEKIIYEENFEDRSGIEGGFLGCEDSTLYLDT
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEECCCCCEEEEEC
QNPARTGEGVWNKNISLSPGKISWNWEGQDTDNFSLWLKISFSDHKSIYYVAAGSRNPQS
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCC
EGEFYRDEENRRRFSPSVVISGIPMGLVERDIIADYTGYCGPAENIKIVKMSAGFVDNST
CCCCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCC
DHTNLLKISDLKIHGKA
CCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA