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The map label for this gene is yrkE [H]

Identifier: 21228058

GI number: 21228058

Start: 2326429

End: 2326854

Strand: Reverse

Name: yrkE [H]

Synonym: MM_1956

Alternate gene names: 21228058

Gene position: 2326854-2326429 (Counterclockwise)

Preceding gene: 21228059

Following gene: 21228057

Centisome position: 56.8

GC content: 45.77

Gene sequence:

>426_bases
GTGGAGATGGGGGAAAAGGCGGTAATCGTCCTTCACAGCGGGGATATGGATAAGGTATACAGCGCACTTATAATTGCAAA
CGGAGCCCTTGCGATGGGTATGGAAGCTTCGATATACTTTACCTTCTGGGGGCTCATGAGGCTTAAAAAAGGGGAACTTG
AAAAAGGTCCGCTTTCCAGAATGAACATGATGGGTGCTGGAAAGCAGATGATCAAACAGAGAATGGATAAAGCCCATGTT
GCATCGCTGGAAAAGCTGATGAATGACTTCAAGGAGCTTGGGGGAAAAATCATAGCCTGCGAAATGACTATGGAGATCAT
GGGCATAGAAAAGGAAGAAATTCAAACGGAATGGGTGGATGAATGGGGAGCTGTTGGTTCGTACATCCATGAAGCAAGGG
ATGCAACCATAACTCTCTTTATCTGA

Upstream 100 bases:

>100_bases
ATGGCATGTGAGGCTCTGGGGCTCACCGTGCTGGAGATTGAAGACAAAAAAGAAGGAAAAGAATGGGAAATAAAAATCCG
GAGGTAAGGCCGGGAAAGGA

Downstream 100 bases:

>100_bases
CTTTGAGAGTTGAAAATAAGTTTCAGCAACAGTAAGATTATTCAGGCTTTCATTTTTACCCCGGGCCTTCATCGCAATTT
ATCGGGCCAGATCCACTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MEMGEKAVIVLHSGDMDKVYSALIIANGALAMGMEASIYFTFWGLMRLKKGELEKGPLSRMNMMGAGKQMIKQRMDKAHV
ASLEKLMNDFKELGGKIIACEMTMEIMGIEKEEIQTEWVDEWGAVGSYIHEARDATITLFI

Sequences:

>Translated_141_residues
MEMGEKAVIVLHSGDMDKVYSALIIANGALAMGMEASIYFTFWGLMRLKKGELEKGPLSRMNMMGAGKQMIKQRMDKAHV
ASLEKLMNDFKELGGKIIACEMTMEIMGIEKEEIQTEWVDEWGAVGSYIHEARDATITLFI
>Mature_141_residues
MEMGEKAVIVLHSGDMDKVYSALIIANGALAMGMEASIYFTFWGLMRLKKGELEKGPLSRMNMMGAGKQMIKQRMDKAHV
ASLEKLMNDFKELGGKIIACEMTMEIMGIEKEEIQTEWVDEWGAVGSYIHEARDATITLFI

Specific function: Unknown

COG id: COG2210

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003787 [H]

Pfam domain/function: PF02635 DrsE [H]

EC number: NA

Molecular weight: Translated: 15813; Mature: 15813

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
10.6 %Met     (Translated Protein)
11.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
10.6 %Met     (Mature Protein)
11.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMGEKAVIVLHSGDMDKVYSALIIANGALAMGMEASIYFTFWGLMRLKKGELEKGPLSR
CCCCCEEEEEEECCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
MNMMGAGKQMIKQRMDKAHVASLEKLMNDFKELGGKIIACEMTMEIMGIEKEEIQTEWVD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHCCCHHHHHHHHHH
EWGAVGSYIHEARDATITLFI
HHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MEMGEKAVIVLHSGDMDKVYSALIIANGALAMGMEASIYFTFWGLMRLKKGELEKGPLSR
CCCCCEEEEEEECCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHH
MNMMGAGKQMIKQRMDKAHVASLEKLMNDFKELGGKIIACEMTMEIMGIEKEEIQTEWVD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEHHHHCCCHHHHHHHHHH
EWGAVGSYIHEARDATITLFI
HHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]