| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21228031
Identifier: 21228031
GI number: 21228031
Start: 2294319
End: 2295377
Strand: Direct
Name: 21228031
Synonym: MM_1929
Alternate gene names: NA
Gene position: 2294319-2295377 (Clockwise)
Preceding gene: 21228029
Following gene: 21228033
Centisome position: 56.01
GC content: 44.85
Gene sequence:
>1059_bases ATGTTCCTGAACGAAAACAGAATTGTAGAAAAGATCTGTGAATTTCCGACTACTCTTGGAGATATCTCCGAAAACATTTT CGGAGGAATCAGCTCAAAAAATAGCCTTCTTCACAGGCTCGTCGTTCCAGAAGGAAGCGGTTCCGAGTCGCTTTACCTTT GTGAGGGCCTCTGTAAACCCGTAATTTTAGAATCCGAGCTTATTTATCCCTATGTCTCAGGCTCTTTTCCCGAAAAGTTT GCACTTAACTCTTCACCCTACCGTTTTATGCTCCCCTATGAGCTGTCGGAAAAAGACAACAGGAAGGAGTGCAGAATAAT TCCTCCTGAAGAACTTAGAGTCAGGTTCCCTCTGACATACGGGAGAATTCTGGAATTCAAAAACCAGTTTGGTCATGATG ATTCTCCTGTAGAACCTGCAGACTACAGCATAAGAGGAAGAAAACTTCTGGAGTACCTCAATACTCCAAAGATCATTGCT ACCGAAGGGTACCGCTTGCAGGCAGCATATGATGTTTCCGGAAACCATGTGTTTAAGGACGGCTGCGGTATTGTACTCAA AGACCCTGAAAAGTACCCCTATGTGACTGCAGTGCTTAACAGCCAGATTTCGAGGCTTTTTCCATCGGTCTGCGAGTATG AGATGATTTACTCAAGCTCCACAACCCCTGCAGTAATGAAACGTTTCCCAATAGTGTTTCCCGAGGACCGGTTGACTGAG GACCTGATTAACAGCATTTCCGGTTACCTCATGTTCCTTAACCAGCAAAAATATGAGGCAGGATACAGTGCTCCTGACTG GCTTAATGAGCTTGCAGGTTTCTATGAGCAGATCTCGGACCTTCTGGTCGTGGACGCTTACTTTGAAAACGGGATTGACC CCAGGCTCCTTGGTGCTCTTGAGGAGAATATCCACCCATATGCCGGAGATATGGAGTCTGAAAGCGATGAGAGCCTTCTG AGCGTGCTCCATTACATCAGGCAAAAGATTATGGAAAGCTCTAACTTCAATAAATACACTTTCAATAAAGAGTTTTCCGG GATTCTCAGCTTTCTTTAA
Upstream 100 bases:
>100_bases GGCTGATACCAGATTATTTTTCGAAATCTCAGGCGGGATTCGACCTGAGAATAAAAACAGGAGAAATTAATTTTCTCAAT ATTACAGAAGTGAAAAATAG
Downstream 100 bases:
>100_bases GCATGGAAAATATCTGAATGACCCTTATCCCGGGTTTATTCAAAATTTTAATTTGGCATGAAAGTCCATGATGAGAAAAC TCATCACGTACTCTCTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MFLNENRIVEKICEFPTTLGDISENIFGGISSKNSLLHRLVVPEGSGSESLYLCEGLCKPVILESELIYPYVSGSFPEKF ALNSSPYRFMLPYELSEKDNRKECRIIPPEELRVRFPLTYGRILEFKNQFGHDDSPVEPADYSIRGRKLLEYLNTPKIIA TEGYRLQAAYDVSGNHVFKDGCGIVLKDPEKYPYVTAVLNSQISRLFPSVCEYEMIYSSSTTPAVMKRFPIVFPEDRLTE DLINSISGYLMFLNQQKYEAGYSAPDWLNELAGFYEQISDLLVVDAYFENGIDPRLLGALEENIHPYAGDMESESDESLL SVLHYIRQKIMESSNFNKYTFNKEFSGILSFL
Sequences:
>Translated_352_residues MFLNENRIVEKICEFPTTLGDISENIFGGISSKNSLLHRLVVPEGSGSESLYLCEGLCKPVILESELIYPYVSGSFPEKF ALNSSPYRFMLPYELSEKDNRKECRIIPPEELRVRFPLTYGRILEFKNQFGHDDSPVEPADYSIRGRKLLEYLNTPKIIA TEGYRLQAAYDVSGNHVFKDGCGIVLKDPEKYPYVTAVLNSQISRLFPSVCEYEMIYSSSTTPAVMKRFPIVFPEDRLTE DLINSISGYLMFLNQQKYEAGYSAPDWLNELAGFYEQISDLLVVDAYFENGIDPRLLGALEENIHPYAGDMESESDESLL SVLHYIRQKIMESSNFNKYTFNKEFSGILSFL >Mature_352_residues MFLNENRIVEKICEFPTTLGDISENIFGGISSKNSLLHRLVVPEGSGSESLYLCEGLCKPVILESELIYPYVSGSFPEKF ALNSSPYRFMLPYELSEKDNRKECRIIPPEELRVRFPLTYGRILEFKNQFGHDDSPVEPADYSIRGRKLLEYLNTPKIIA TEGYRLQAAYDVSGNHVFKDGCGIVLKDPEKYPYVTAVLNSQISRLFPSVCEYEMIYSSSTTPAVMKRFPIVFPEDRLTE DLINSISGYLMFLNQQKYEAGYSAPDWLNELAGFYEQISDLLVVDAYFENGIDPRLLGALEENIHPYAGDMESESDESLL SVLHYIRQKIMESSNFNKYTFNKEFSGILSFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40207; Mature: 40207
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLNENRIVEKICEFPTTLGDISENIFGGISSKNSLLHRLVVPEGSGSESLYLCEGLCKP CCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCEEEHHHCCCC VILESELIYPYVSGSFPEKFALNSSPYRFMLPYELSEKDNRKECRIIPPEELRVRFPLTY EEECCCEEEEECCCCCCCHHCCCCCCEEEEECEECCCCCCCCCCEECCHHHCEEEECCHH GRILEFKNQFGHDDSPVEPADYSIRGRKLLEYLNTPKIIATEGYRLQAAYDVSGNHVFKD HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEEEEEEECCCCEEEEC GCGIVLKDPEKYPYVTAVLNSQISRLFPSVCEYEMIYSSSTTPAVMKRFPIVFPEDRLTE CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCHHHHHHCCCCCCCHHHHH DLINSISGYLMFLNQQKYEAGYSAPDWLNELAGFYEQISDLLVVDAYFENGIDPRLLGAL HHHHHHHHHEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEHHHHCCCCHHHHHHH EENIHPYAGDMESESDESLLSVLHYIRQKIMESSNFNKYTFNKEFSGILSFL HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCC >Mature Secondary Structure MFLNENRIVEKICEFPTTLGDISENIFGGISSKNSLLHRLVVPEGSGSESLYLCEGLCKP CCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHEEECCCCCCCCCEEEHHHCCCC VILESELIYPYVSGSFPEKFALNSSPYRFMLPYELSEKDNRKECRIIPPEELRVRFPLTY EEECCCEEEEECCCCCCCHHCCCCCCEEEEECEECCCCCCCCCCEECCHHHCEEEECCHH GRILEFKNQFGHDDSPVEPADYSIRGRKLLEYLNTPKIIATEGYRLQAAYDVSGNHVFKD HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEEEEEEECCCCEEEEC GCGIVLKDPEKYPYVTAVLNSQISRLFPSVCEYEMIYSSSTTPAVMKRFPIVFPEDRLTE CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCHHHHHHCCCCCCCHHHHH DLINSISGYLMFLNQQKYEAGYSAPDWLNELAGFYEQISDLLVVDAYFENGIDPRLLGAL HHHHHHHHHEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEHHHHCCCCHHHHHHH EENIHPYAGDMESESDESLLSVLHYIRQKIMESSNFNKYTFNKEFSGILSFL HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA