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The map label for this gene is 21227981

Identifier: 21227981

GI number: 21227981

Start: 2233429

End: 2234379

Strand: Direct

Name: 21227981

Synonym: MM_1879

Alternate gene names: NA

Gene position: 2233429-2234379 (Clockwise)

Preceding gene: 21227980

Following gene: 21227982

Centisome position: 54.52

GC content: 46.06

Gene sequence:

>951_bases
ATGATTAGAATTCGAAAAAATAAGACTACCAGGAAAAAATTAACAGGTCCTGGTGAAGGAAAGAACGGAGCTGAGAAATC
GGCTCCTTCAAATGAAGAAAGCAGGGATCAATTTAAGGGTCAGCAAAAGGATCAGCCCAGGACTCAATTTAAAAGCCAGC
CCAGGGAGCAGTCAAGAGACCAGTTTAAAGGTCAGCCCCGAGCTCAGTATAAGTCTCAGCCCAGAGACCAGTCCAGAGGG
CAATTCAGAGACCAGTCAAGGGACCAGTTCAAAGGCAGCCCTGATAAAAAGAGAAAATTCCCATATTCCAAGAAAGGTCC
CAGAGATAGAAAGGAAACTCCGGGTTTCAGGCCCCCTACCGCAGAAGCCGTTGTATCTGAAGAAGATCTCGAAAAAGGAG
GCTTTGTACTTCCTGGAGAACTTGTCGGAACTACAGAAGAGTTCAAATCGGGCAATGGAACTGCAGTAATTGCAGGAGAC
ATCTATTCCACTGCTACGGGTAATGTGCTCATTGACAGAAAAGCCAGAGTGGTCTCGGTAAAGCCAAACACAATTACTCC
AAATATCCTCAAAGTAGGAGATGTCGTGTACGGGCGGATATCTGACGTCCGTGAGTCCGGGGCAATGGTGGAAGTCGCAG
GAATTGAAGGGAAAGAAAACAGGGAAATCGTTAGTGTAAGGACCGGAGATATTCATGTCTCCAGTGTGAGAGATTCCTAT
GTGAAGAGGCTGGCAGATGAGTTCAGGCCTTCTGACATAGTAAGAGCAAAGGTAGTTGACGTTGAGAGAATGCGCCTTAC
TACAGCTGAAGATTCTCTTGGAGTTGTAAAAGCTTACTGTTCAAACTGCAAAGGAGAACTTGTGCTGGAAGGGAAAAAGC
TTAAATGCCCGGTCTGCAATATGACTGAAACCCGCAAGATCTCAACTGAGTATGGGAAAGGGATCAGGTAA

Upstream 100 bases:

>100_bases
TGACCGACATCCGGCTTTCCGCCAGCAGTCCCACAAAGGCTATAAAAATTGTTACAACGATTATCTATATTATTAATAGC
GATAATTCGAATGAGGGATC

Downstream 100 bases:

>100_bases
TTTCCTCTTCCTCTTACTTCAGGGATTTACGGCAGGTTAAAGATTTTACGGCATATTTATGACCGGTTAAATTCACCATT
TACAGGTGGTCACCAGTGGA

Product: putative RNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MIRIRKNKTTRKKLTGPGEGKNGAEKSAPSNEESRDQFKGQQKDQPRTQFKSQPREQSRDQFKGQPRAQYKSQPRDQSRG
QFRDQSRDQFKGSPDKKRKFPYSKKGPRDRKETPGFRPPTAEAVVSEEDLEKGGFVLPGELVGTTEEFKSGNGTAVIAGD
IYSTATGNVLIDRKARVVSVKPNTITPNILKVGDVVYGRISDVRESGAMVEVAGIEGKENREIVSVRTGDIHVSSVRDSY
VKRLADEFRPSDIVRAKVVDVERMRLTTAEDSLGVVKAYCSNCKGELVLEGKKLKCPVCNMTETRKISTEYGKGIR

Sequences:

>Translated_316_residues
MIRIRKNKTTRKKLTGPGEGKNGAEKSAPSNEESRDQFKGQQKDQPRTQFKSQPREQSRDQFKGQPRAQYKSQPRDQSRG
QFRDQSRDQFKGSPDKKRKFPYSKKGPRDRKETPGFRPPTAEAVVSEEDLEKGGFVLPGELVGTTEEFKSGNGTAVIAGD
IYSTATGNVLIDRKARVVSVKPNTITPNILKVGDVVYGRISDVRESGAMVEVAGIEGKENREIVSVRTGDIHVSSVRDSY
VKRLADEFRPSDIVRAKVVDVERMRLTTAEDSLGVVKAYCSNCKGELVLEGKKLKCPVCNMTETRKISTEYGKGIR
>Mature_316_residues
MIRIRKNKTTRKKLTGPGEGKNGAEKSAPSNEESRDQFKGQQKDQPRTQFKSQPREQSRDQFKGQPRAQYKSQPRDQSRG
QFRDQSRDQFKGSPDKKRKFPYSKKGPRDRKETPGFRPPTAEAVVSEEDLEKGGFVLPGELVGTTEEFKSGNGTAVIAGD
IYSTATGNVLIDRKARVVSVKPNTITPNILKVGDVVYGRISDVRESGAMVEVAGIEGKENREIVSVRTGDIHVSSVRDSY
VKRLADEFRPSDIVRAKVVDVERMRLTTAEDSLGVVKAYCSNCKGELVLEGKKLKCPVCNMTETRKISTEYGKGIR

Specific function: Unknown

COG id: COG1096

COG function: function code J; Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35200; Mature: 35200

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIRKNKTTRKKLTGPGEGKNGAEKSAPSNEESRDQFKGQQKDQPRTQFKSQPREQSRD
CEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCHHHHHH
QFKGQPRAQYKSQPRDQSRGQFRDQSRDQFKGSPDKKRKFPYSKKGPRDRKETPGFRPPT
HHCCCCCHHHHCCCCHHHHCHHHHCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
AEAVVSEEDLEKGGFVLPGELVGTTEEFKSGNGTAVIAGDIYSTATGNVLIDRKARVVSV
HHHHHCHHHHHCCCEECCCHHHCCHHHHHCCCCCEEEECCCCCCCCCCEEEECCEEEEEE
KPNTITPNILKVGDVVYGRISDVRESGAMVEVAGIEGKENREIVSVRTGDIHVSSVRDSY
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECCEEEHHHHHHH
VKRLADEFRPSDIVRAKVVDVERMRLTTAEDSLGVVKAYCSNCKGELVLEGKKLKCPVCN
HHHHHHHCCCCHHHHHHEECHHHHEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCC
MTETRKISTEYGKGIR
CCCCCCHHHHHCCCCC
>Mature Secondary Structure
MIRIRKNKTTRKKLTGPGEGKNGAEKSAPSNEESRDQFKGQQKDQPRTQFKSQPREQSRD
CEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCHHHHHH
QFKGQPRAQYKSQPRDQSRGQFRDQSRDQFKGSPDKKRKFPYSKKGPRDRKETPGFRPPT
HHCCCCCHHHHCCCCHHHHCHHHHCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
AEAVVSEEDLEKGGFVLPGELVGTTEEFKSGNGTAVIAGDIYSTATGNVLIDRKARVVSV
HHHHHCHHHHHCCCEECCCHHHCCHHHHHCCCCCEEEECCCCCCCCCCEEEECCEEEEEE
KPNTITPNILKVGDVVYGRISDVRESGAMVEVAGIEGKENREIVSVRTGDIHVSSVRDSY
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECCEEEHHHHHHH
VKRLADEFRPSDIVRAKVVDVERMRLTTAEDSLGVVKAYCSNCKGELVLEGKKLKCPVCN
HHHHHHHCCCCHHHHHHEECHHHHEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCC
MTETRKISTEYGKGIR
CCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA