| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227971
Identifier: 21227971
GI number: 21227971
Start: 2219327
End: 2220676
Strand: Direct
Name: 21227971
Synonym: MM_1869
Alternate gene names: NA
Gene position: 2219327-2220676 (Clockwise)
Preceding gene: 21227967
Following gene: 21227972
Centisome position: 54.18
GC content: 46.15
Gene sequence:
>1350_bases ATGACCCTTGAGCCCGTGCATATGCATAAGATCTCGGAGCTTGCAGAGAGAATTGACCGATCATTTGAGCTTGATGACCC GAAAACGGCAGCTGATATTTACAGGCTGCTTGAAGAATTGAAGATTGACGGGAAGGTAATTCTTAAGGCTGTGGACAGGC TCTTTCGGGGAATGGTCAGGACCGAGCTGATGGCTCAGGGCGAAGATCCTTATCCTGTTACCTATGCCTGCGACAGCGGG AGCACGAATCCCAAAACTTATGACAGCGGGCTTTTTGTAGACTTCTGCCACTGCGGGCTGGCTGCAACGCCTACTGACCT TGATGTTCAGAGGTGCAGGACAATTGTCTGTGCAGCTTATTCCTCTTCCCGGAGAATTGCAATGCGGGCGACACCAGGAT GGGAAACCTTTGATGAAGGGCTTGGAAGGGCGAAGCTTGTAACAATTGCTCCTGATGAGCTTAAAAGAAAAGCTCCTGAT ATGGTACACAGCTTTGCCATGTACCTGGCAGAATCCGAACATTTGCTTTTTATGAAGGACAGGCTGGAGCCTGAAAGCTT TTTCATAATGGACGGGCCCATTTATCCAAAGCAGCTCATGTACTGGATGGTTCTGGACGACGCTGAAGTAAGGATCAGGC AGAACCCTGATGCCCGAAAAATTCTCCAGAATTACATTGATGTCATGGACCATTTTCTGGAAATGAAGATCCCTGTAATT GGGTTTGTAAAAAATCCTACTGATATGCAGATCATGGACAGCGTGAGAAAGAAAAGAGAAGCTTTTGACCTTCCATGGAT GCTGGATGCCCAGTTTTTCAAAAATGTACTCTCACTGGAAAAAGCAGGGGGAACTTCCGGGAATGGGCATGAAGGGCGGT ACTCAAACAATAATGGAAATAACGGGAATAATTGCAGGCACTATGGTTCCAGAAGTGCTTATCTCACTTACACCAACTGG TTTTTACAGCCCAACAGGTATTACGAAAAGATGCTTAAAGGGACTTCCCCGCTTGCAGCCGGGGATATGATTCAGCAAAA GCTCAGGCACAGGTTTTCTCCTGAAGATTATGCACTATGCTTCTTCATGCTTTACGTGCCTTCAAAGGATGTGGTTTTTA AGGTTGAAGCCCCTTACGGGCTTATTAAGGATGATTTCCTGCGTATGCAAATTACTAAAAAAGTGCTCTTTGACGTTTCT CTGCACGGTTTTCCCCTTACCCTCACAAAGGCAGACCACCTCGCAAAAATCCGGAAAGTGGAGAGGCAGGAAATCGATAA ATTCTTTGAAAGCATGAGTCCTGATACAACTTATAATGACACCCGGTGGGGTAAGTTCAATGACATATGA
Upstream 100 bases:
>100_bases TGCAGTAAGTTTTTCCTTTATATACTTGGTTTCTTATCAGTAAAACTAGACCGGCTTTCACTCAACAAATATATATTACT GTTTAAAGTATCTTTTATTC
Downstream 100 bases:
>100_bases AGATGCCGATATTTTCGCTTTTATTTCCAAAAAATCCAGGCCGGTTTCTGCTCCTGAAAAGGTTACTGTTTCGGAAAATG AGACACTTTCAGGCGGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Nura Domain-Containing Protein; NurA Domain-Containing Protein
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MTLEPVHMHKISELAERIDRSFELDDPKTAADIYRLLEELKIDGKVILKAVDRLFRGMVRTELMAQGEDPYPVTYACDSG STNPKTYDSGLFVDFCHCGLAATPTDLDVQRCRTIVCAAYSSSRRIAMRATPGWETFDEGLGRAKLVTIAPDELKRKAPD MVHSFAMYLAESEHLLFMKDRLEPESFFIMDGPIYPKQLMYWMVLDDAEVRIRQNPDARKILQNYIDVMDHFLEMKIPVI GFVKNPTDMQIMDSVRKKREAFDLPWMLDAQFFKNVLSLEKAGGTSGNGHEGRYSNNNGNNGNNCRHYGSRSAYLTYTNW FLQPNRYYEKMLKGTSPLAAGDMIQQKLRHRFSPEDYALCFFMLYVPSKDVVFKVEAPYGLIKDDFLRMQITKKVLFDVS LHGFPLTLTKADHLAKIRKVERQEIDKFFESMSPDTTYNDTRWGKFNDI
Sequences:
>Translated_449_residues MTLEPVHMHKISELAERIDRSFELDDPKTAADIYRLLEELKIDGKVILKAVDRLFRGMVRTELMAQGEDPYPVTYACDSG STNPKTYDSGLFVDFCHCGLAATPTDLDVQRCRTIVCAAYSSSRRIAMRATPGWETFDEGLGRAKLVTIAPDELKRKAPD MVHSFAMYLAESEHLLFMKDRLEPESFFIMDGPIYPKQLMYWMVLDDAEVRIRQNPDARKILQNYIDVMDHFLEMKIPVI GFVKNPTDMQIMDSVRKKREAFDLPWMLDAQFFKNVLSLEKAGGTSGNGHEGRYSNNNGNNGNNCRHYGSRSAYLTYTNW FLQPNRYYEKMLKGTSPLAAGDMIQQKLRHRFSPEDYALCFFMLYVPSKDVVFKVEAPYGLIKDDFLRMQITKKVLFDVS LHGFPLTLTKADHLAKIRKVERQEIDKFFESMSPDTTYNDTRWGKFNDI >Mature_448_residues TLEPVHMHKISELAERIDRSFELDDPKTAADIYRLLEELKIDGKVILKAVDRLFRGMVRTELMAQGEDPYPVTYACDSGS TNPKTYDSGLFVDFCHCGLAATPTDLDVQRCRTIVCAAYSSSRRIAMRATPGWETFDEGLGRAKLVTIAPDELKRKAPDM VHSFAMYLAESEHLLFMKDRLEPESFFIMDGPIYPKQLMYWMVLDDAEVRIRQNPDARKILQNYIDVMDHFLEMKIPVIG FVKNPTDMQIMDSVRKKREAFDLPWMLDAQFFKNVLSLEKAGGTSGNGHEGRYSNNNGNNGNNCRHYGSRSAYLTYTNWF LQPNRYYEKMLKGTSPLAAGDMIQQKLRHRFSPEDYALCFFMLYVPSKDVVFKVEAPYGLIKDDFLRMQITKKVLFDVSL HGFPLTLTKADHLAKIRKVERQEIDKFFESMSPDTTYNDTRWGKFNDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51811; Mature: 51680
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEPVHMHKISELAERIDRSFELDDPKTAADIYRLLEELKIDGKVILKAVDRLFRGMVR CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TELMAQGEDPYPVTYACDSGSTNPKTYDSGLFVDFCHCGLAATPTDLDVQRCRTIVCAAY HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHEEE SSSRRIAMRATPGWETFDEGLGRAKLVTIAPDELKRKAPDMVHSFAMYLAESEHLLFMKD CCCCEEEEEECCCCHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC RLEPESFFIMDGPIYPKQLMYWMVLDDAEVRIRQNPDARKILQNYIDVMDHFLEMKIPVI CCCCCEEEEECCCCCHHHEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEE GFVKNPTDMQIMDSVRKKREAFDLPWMLDAQFFKNVLSLEKAGGTSGNGHEGRYSNNNGN EEECCCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NGNNCRHYGSRSAYLTYTNWFLQPNRYYEKMLKGTSPLAAGDMIQQKLRHRFSPEDYALC CCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHEE FFMLYVPSKDVVFKVEAPYGLIKDDFLRMQITKKVLFDVSLHGFPLTLTKADHLAKIRKV EEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCEEEECCHHHHHHHHHH ERQEIDKFFESMSPDTTYNDTRWGKFNDI HHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLEPVHMHKISELAERIDRSFELDDPKTAADIYRLLEELKIDGKVILKAVDRLFRGMVR CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH TELMAQGEDPYPVTYACDSGSTNPKTYDSGLFVDFCHCGLAATPTDLDVQRCRTIVCAAY HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHEEE SSSRRIAMRATPGWETFDEGLGRAKLVTIAPDELKRKAPDMVHSFAMYLAESEHLLFMKD CCCCEEEEEECCCCHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC RLEPESFFIMDGPIYPKQLMYWMVLDDAEVRIRQNPDARKILQNYIDVMDHFLEMKIPVI CCCCCEEEEECCCCCHHHEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEE GFVKNPTDMQIMDSVRKKREAFDLPWMLDAQFFKNVLSLEKAGGTSGNGHEGRYSNNNGN EEECCCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC NGNNCRHYGSRSAYLTYTNWFLQPNRYYEKMLKGTSPLAAGDMIQQKLRHRFSPEDYALC CCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHEE FFMLYVPSKDVVFKVEAPYGLIKDDFLRMQITKKVLFDVSLHGFPLTLTKADHLAKIRKV EEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCEEEECCHHHHHHHHHH ERQEIDKFFESMSPDTTYNDTRWGKFNDI HHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA