| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227969
Identifier: 21227969
GI number: 21227969
Start: 2218665
End: 2218868
Strand: Reverse
Name: 21227969
Synonym: MM_1867
Alternate gene names: NA
Gene position: 2218868-2218665 (Counterclockwise)
Preceding gene: 21227970
Following gene: 21227968
Centisome position: 54.17
GC content: 30.39
Gene sequence:
>204_bases TTGATCAAGGGGAAGCTTTTAAAAGAACTGCGAAAGTTAAACAAGAAGAATCATGTACTTTTCGAGGCAGTCTTCAAAAA AGCTGATGAAATGTGTATCAATCCTCAACATTACAAAAATCTCAATTATCCCTTAAATAAATATAAACGAGTACATATTG ATTCTAACTTTGTACTATGTTTTTCTGTTGACGAAAAAGAGTAA
Upstream 100 bases:
>100_bases CGGAGAGTGATGAAGTAATTGGACCATTCAAAAATGCCGATGAACTAAAAGCATACATCAAAAGCTTGCCTGATGAGGAT GAGTAAGCTTGTACAAATTA
Downstream 100 bases:
>100_bases ACTGTGACATTGGTGAAATTAGCCCATCACAAAGATGCTTATTGATTAAAGTTTAAAAATTGGGTAATAGACTTGAGGAG TTATTGAAAGCCACAAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MIKGKLLKELRKLNKKNHVLFEAVFKKADEMCINPQHYKNLNYPLNKYKRVHIDSNFVLCFSVDEKE
Sequences:
>Translated_67_residues MIKGKLLKELRKLNKKNHVLFEAVFKKADEMCINPQHYKNLNYPLNKYKRVHIDSNFVLCFSVDEKE >Mature_67_residues MIKGKLLKELRKLNKKNHVLFEAVFKKADEMCINPQHYKNLNYPLNKYKRVHIDSNFVLCFSVDEKE
Specific function: Unknown
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1173 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8053; Mature: 8053
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKGKLLKELRKLNKKNHVLFEAVFKKADEMCINPQHYKNLNYPLNKYKRVHIDSNFVLC CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECCCEEEE FSVDEKE EECCCCC >Mature Secondary Structure MIKGKLLKELRKLNKKNHVLFEAVFKKADEMCINPQHYKNLNYPLNKYKRVHIDSNFVLC CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCEEEEEECCCEEEE FSVDEKE EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824 [H]