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The map label for this gene is yybA [H]

Identifier: 21227965

GI number: 21227965

Start: 2215312

End: 2215782

Strand: Reverse

Name: yybA [H]

Synonym: MM_1863

Alternate gene names: 21227965

Gene position: 2215782-2215312 (Counterclockwise)

Preceding gene: 21227968

Following gene: 21227964

Centisome position: 54.09

GC content: 38.43

Gene sequence:

>471_bases
ATGAATACAACAGAATTCGATGGAATCTCACATGCTGAAGGATTATGTGATAAGGAATTCATTGGAAAGGCCATCTCATA
TCTCTACAGATATGGACAAATCTATATTGGGAAAAAAATTGAGCCATATGGTATTGGAAGCGGACAGTTTCCTTTTCTTA
TGAGACTGTATCGTGAGGATGGGATCAATCAGGAGAGTCTTTCTGACTATCTAAAAATTGATAAGGGCACTACTGCAAGG
GCTATACAGAAACTTGTTGATGAGGGTTATGTTTTCAGACAGAGGGATGAGAAAGACAGACGATCATACCGGGTTTTTCT
TACCGAGAAAGGGAAAAAGCTGGAACCTGATATGAAAAAAATAGCTTCAGAGTGGGGGGAGATTCTCTTCTCCAGTTTTG
ATGACAGGCAAAGAAGAGAGATTACGAATTCACTTGAAATTATGTTTGAGAATGGACTCAAAATAATGTGA

Upstream 100 bases:

>100_bases
GTTGCATCGACAACTATATATAAAATTAATTGATTATATCCATGCCTGATATGGTTGTGTTTGCAACCATATTAAAGATA
CAATTTGGTGGGATAATAAA

Downstream 100 bases:

>100_bases
ATAACGGGGCAAGATCATGCAATTTAAAAATACTCATCTTCTAATACTTTGTATTACTGCATGTTTCGCAATGGCAGGCG
GCTCTCTTTTAACACCAGTA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MNTTEFDGISHAEGLCDKEFIGKAISYLYRYGQIYIGKKIEPYGIGSGQFPFLMRLYREDGINQESLSDYLKIDKGTTAR
AIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLEPDMKKIASEWGEILFSSFDDRQRREITNSLEIMFENGLKIM

Sequences:

>Translated_156_residues
MNTTEFDGISHAEGLCDKEFIGKAISYLYRYGQIYIGKKIEPYGIGSGQFPFLMRLYREDGINQESLSDYLKIDKGTTAR
AIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLEPDMKKIASEWGEILFSSFDDRQRREITNSLEIMFENGLKIM
>Mature_156_residues
MNTTEFDGISHAEGLCDKEFIGKAISYLYRYGQIYIGKKIEPYGIGSGQFPFLMRLYREDGINQESLSDYLKIDKGTTAR
AIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLEPDMKKIASEWGEILFSSFDDRQRREITNSLEIMFENGLKIM

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18266; Mature: 18266

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTEFDGISHAEGLCDKEFIGKAISYLYRYGQIYIGKKIEPYGIGSGQFPFLMRLYRED
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHC
GINQESLSDYLKIDKGTTARAIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLEPDMKK
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCCHHHHHHEEEEEECCCCCCCHHHHH
IASEWGEILFSSFDDRQRREITNSLEIMFENGLKIM
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNTTEFDGISHAEGLCDKEFIGKAISYLYRYGQIYIGKKIEPYGIGSGQFPFLMRLYRED
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHC
GINQESLSDYLKIDKGTTARAIQKLVDEGYVFRQRDEKDRRSYRVFLTEKGKKLEPDMKK
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCCHHHHHHEEEEEECCCCCCCHHHHH
IASEWGEILFSSFDDRQRREITNSLEIMFENGLKIM
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]