| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227954
Identifier: 21227954
GI number: 21227954
Start: 2203099
End: 2204154
Strand: Direct
Name: 21227954
Synonym: MM_1852
Alternate gene names: NA
Gene position: 2203099-2204154 (Clockwise)
Preceding gene: 21227953
Following gene: 21227955
Centisome position: 53.78
GC content: 47.44
Gene sequence:
>1056_bases ATGAATCCAGATAAAACTGTTTTATCCTGCCATAACCCTGAATGGAGGGGAGAACGCCCTGCCCCAAGCCTGATCGCACG CTGTGCACAGCTTGCCATGCTGCTTGAGGTATCAGCTTCCCCTAAACCGGGAAACGTTGACAGGGAACATAATTATCCAG ACACCTGTTTTGAACATTTTGTTGCCTCTTCAGTTGCCGTATATCCTGTCTTTGAGCTTGCCGCAAAAAGCACGGGACGG ATAGGACAGCTTCTCAGAAGTGCAGTTTATGAAAGTTCTGCCTGGCAGCAGGGAGGAAACACTCATTTCGGGGCTTTTTT ACTCCTGATCCCCCTGGCAATGGCTGCAGGTGAAATTTCTAGAGAACAGGGAGAGCAACCCGGTTGTGGAAAAACATTTT TCCGGATCGAGGCAGAGGAATTTGAGAACCTTGCTTCCCATGCCCATGCTTTTGTCCGGGAAACGGACTGTGAAGATGCT GTTGAGTTCTACAGGGCTTTCGGGCATGCAGGGGTAAGGGTAAACAGCGTTGAAGAATTTGACCTTGAAGACCCTGAAGC AACTTCCGACCTCAGGAATCAGAATATTACCCTTTACTCCCTTATGGAAATTGCAAAGGGCTATGACCTGATCGCAAATG AATGGACATCAGGTTTCGGGCGCTGCCTTGAAGGAGCAAAAATCATTCTTGATTTCATGGATGCACGGAACTGCCGGGAA GAAGCTCTGGCAGGAGGCTCGGTTTCCATATGTTCGGGCACAGGGATCAATGAGGCTGTGGTATACACTTTCCTTAAACT GCTTTCAAAACACAGGGACACCTTTATCCAGACCAAATTTGACGCCGAAACTGCAGATTACGTTTCTTCCAGAGCAGGTG AGGTTCTTTCAGGCTGGGAAATTTCAGGGAAAAAAGCAGGAGATTTTGCTTCTATTCTTCCCAGAATACAGGAATTTGAT TCCGAGCTTCTGGATAAAAGGATCAACCCGGGTTCTACGGCAGATATCATTATTGCAGCACTTTTTATTGCCCTTCTTGG AGGCCTGAGATTTTGA
Upstream 100 bases:
>100_bases GACGGTGTGCTGAACACTATAGACCTCTCTGACGCAGAATACATGAAGCTTAAAGAGAAGCTGGCAAAACATATCCTTGA CAATGCCAGGATTCCGGTAA
Downstream 100 bases:
>100_bases TCGGGTTCCTGTCTGATCGCCAGGGGTTTGAAAAACAGTATCATGATATTGACCTCTCGTCTTTCGGGATCAGGGAGGGA ATTTCCGAGATCATCGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MNPDKTVLSCHNPEWRGERPAPSLIARCAQLAMLLEVSASPKPGNVDREHNYPDTCFEHFVASSVAVYPVFELAAKSTGR IGQLLRSAVYESSAWQQGGNTHFGAFLLLIPLAMAAGEISREQGEQPGCGKTFFRIEAEEFENLASHAHAFVRETDCEDA VEFYRAFGHAGVRVNSVEEFDLEDPEATSDLRNQNITLYSLMEIAKGYDLIANEWTSGFGRCLEGAKIILDFMDARNCRE EALAGGSVSICSGTGINEAVVYTFLKLLSKHRDTFIQTKFDAETADYVSSRAGEVLSGWEISGKKAGDFASILPRIQEFD SELLDKRINPGSTADIIIAALFIALLGGLRF
Sequences:
>Translated_351_residues MNPDKTVLSCHNPEWRGERPAPSLIARCAQLAMLLEVSASPKPGNVDREHNYPDTCFEHFVASSVAVYPVFELAAKSTGR IGQLLRSAVYESSAWQQGGNTHFGAFLLLIPLAMAAGEISREQGEQPGCGKTFFRIEAEEFENLASHAHAFVRETDCEDA VEFYRAFGHAGVRVNSVEEFDLEDPEATSDLRNQNITLYSLMEIAKGYDLIANEWTSGFGRCLEGAKIILDFMDARNCRE EALAGGSVSICSGTGINEAVVYTFLKLLSKHRDTFIQTKFDAETADYVSSRAGEVLSGWEISGKKAGDFASILPRIQEFD SELLDKRINPGSTADIIIAALFIALLGGLRF >Mature_351_residues MNPDKTVLSCHNPEWRGERPAPSLIARCAQLAMLLEVSASPKPGNVDREHNYPDTCFEHFVASSVAVYPVFELAAKSTGR IGQLLRSAVYESSAWQQGGNTHFGAFLLLIPLAMAAGEISREQGEQPGCGKTFFRIEAEEFENLASHAHAFVRETDCEDA VEFYRAFGHAGVRVNSVEEFDLEDPEATSDLRNQNITLYSLMEIAKGYDLIANEWTSGFGRCLEGAKIILDFMDARNCRE EALAGGSVSICSGTGINEAVVYTFLKLLSKHRDTFIQTKFDAETADYVSSRAGEVLSGWEISGKKAGDFASILPRIQEFD SELLDKRINPGSTADIIIAALFIALLGGLRF
Specific function: Unknown
COG id: COG1767
COG function: function code H; Triphosphoribosyl-dephospho-CoA synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002736 [H]
Pfam domain/function: PF01874 CitG [H]
EC number: NA
Molecular weight: Translated: 38521; Mature: 38521
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPDKTVLSCHNPEWRGERPAPSLIARCAQLAMLLEVSASPKPGNVDREHNYPDTCFEHF CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH VASSVAVYPVFELAAKSTGRIGQLLRSAVYESSAWQQGGNTHFGAFLLLIPLAMAAGEIS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH REQGEQPGCGKTFFRIEAEEFENLASHAHAFVRETDCEDAVEFYRAFGHAGVRVNSVEEF HHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEECCCHHC DLEDPEATSDLRNQNITLYSLMEIAKGYDLIANEWTSGFGRCLEGAKIILDFMDARNCRE CCCCCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALAGGSVSICSGTGINEAVVYTFLKLLSKHRDTFIQTKFDAETADYVSSRAGEVLSGWE HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCC ISGKKAGDFASILPRIQEFDSELLDKRINPGSTADIIIAALFIALLGGLRF CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNPDKTVLSCHNPEWRGERPAPSLIARCAQLAMLLEVSASPKPGNVDREHNYPDTCFEHF CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH VASSVAVYPVFELAAKSTGRIGQLLRSAVYESSAWQQGGNTHFGAFLLLIPLAMAAGEIS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH REQGEQPGCGKTFFRIEAEEFENLASHAHAFVRETDCEDAVEFYRAFGHAGVRVNSVEEF HHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEECCCHHC DLEDPEATSDLRNQNITLYSLMEIAKGYDLIANEWTSGFGRCLEGAKIILDFMDARNCRE CCCCCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALAGGSVSICSGTGINEAVVYTFLKLLSKHRDTFIQTKFDAETADYVSSRAGEVLSGWE HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCCC ISGKKAGDFASILPRIQEFDSELLDKRINPGSTADIIIAALFIALLGGLRF CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]