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The map label for this gene is 21227953

Identifier: 21227953

GI number: 21227953

Start: 2201994

End: 2203112

Strand: Direct

Name: 21227953

Synonym: MM_1851

Alternate gene names: NA

Gene position: 2201994-2203112 (Clockwise)

Preceding gene: 21227952

Following gene: 21227954

Centisome position: 53.76

GC content: 47.54

Gene sequence:

>1119_bases
TTGTATACTGGTTATGTCCGTTTTAGAAATCCTATTGCACTTGCTCCAATGGCAGGAATTGCAGACAGTGCTTTTGCCAA
CCAGTATGCAGGCGATGCCGGGCTGGTAGTGCTTGGAGCCTTCAACCTTGATAATGGGTCGATGGAAGTTGCATCAAAAC
TCGTAGCCCGGGGAAGGAAAGAGTTCATTTCCGATGAACCTCTGGAGCTTATAAAACAGGAAATTCGGGCGGTAAACTCA
GGAAGTGCTGTTGCGGTAAATGTGAGGAGCACTAACCTTGAGCCCCTGATTGAAGCTGCAAAACTTGTAAAGGAAGAAGG
CGCAATTCTTGAATTAAATGCCCACTGCAAACAGCCTGAAATGCTTGAATCCGGCATAGGAGAAGCTCTTTTGCATGATC
TCCCGAGGCTCTCTGCCTGGATAAAGGCAATAAAAGAGACCGGAGTTGTTCTCTCCGTAAAGGTAAGGGCAAACGTGGTA
AATGACGTCGAACTTGCCAGGCTTATTGATAAGGCAGGAGCTGATATTATCCATGTTGACGCCATGCTTGAAGGCTTTGG
AGCCGACCTTGATGCAATTTCAAATTACAGGGACGCTACAAGGCTCTTTCTTATAGGCAACAACTCGATCACTGATTTTG
CCGCTGCAAAGGAGATGTTCTCCCGGGGAGCCGACATGGTATCCGTTGCAAGGGGAGCCATGGAGAATTCAGACCTGATA
AAGGAACTTGTAGAAAGTATCACTTCTTATCAGCAGTCAATAGGCTGGTATAATGCTCCCAAACACGTTTGCAGTGAAGG
GGACTTCAGAGGACTGGCTTTCTGCTGCCTTCCGGTAAAACCCTGTCCTGTGCACGCGAAATTCAAAAAGCTGGGATATA
CCGCAGAAGAATTCGCCCGCACAAAACTGGAATTTGCCAGGGGCACAATGCTTGAATTCGGAGAGGACACCTGTTTCGGG
AGCCTGGTCTGGTGCTGCAAGATTACAAAGCCCTGCTGGATCAGGGACGGTGTGCTGAACACTATAGACCTCTCTGACGC
AGAATACATGAAGCTTAAAGAGAAGCTGGCAAAACATATCCTTGACAATGCCAGGATTCCGGTAAATGAATCCAGATAA

Upstream 100 bases:

>100_bases
AAAAGATTCGTTAGTTTAATATCTGACTATAACTATCATTTTTGTGTTCATTTCCACGCTTATTTTTAAGAGGTAAAACA
TGAGTGATTATCTATTTGAT

Downstream 100 bases:

>100_bases
AACTGTTTTATCCTGCCATAACCCTGAATGGAGGGGAGAACGCCCTGCCCCAAGCCTGATCGCACGCTGTGCACAGCTTG
CCATGCTGCTTGAGGTATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MYTGYVRFRNPIALAPMAGIADSAFANQYAGDAGLVVLGAFNLDNGSMEVASKLVARGRKEFISDEPLELIKQEIRAVNS
GSAVAVNVRSTNLEPLIEAAKLVKEEGAILELNAHCKQPEMLESGIGEALLHDLPRLSAWIKAIKETGVVLSVKVRANVV
NDVELARLIDKAGADIIHVDAMLEGFGADLDAISNYRDATRLFLIGNNSITDFAAAKEMFSRGADMVSVARGAMENSDLI
KELVESITSYQQSIGWYNAPKHVCSEGDFRGLAFCCLPVKPCPVHAKFKKLGYTAEEFARTKLEFARGTMLEFGEDTCFG
SLVWCCKITKPCWIRDGVLNTIDLSDAEYMKLKEKLAKHILDNARIPVNESR

Sequences:

>Translated_372_residues
MYTGYVRFRNPIALAPMAGIADSAFANQYAGDAGLVVLGAFNLDNGSMEVASKLVARGRKEFISDEPLELIKQEIRAVNS
GSAVAVNVRSTNLEPLIEAAKLVKEEGAILELNAHCKQPEMLESGIGEALLHDLPRLSAWIKAIKETGVVLSVKVRANVV
NDVELARLIDKAGADIIHVDAMLEGFGADLDAISNYRDATRLFLIGNNSITDFAAAKEMFSRGADMVSVARGAMENSDLI
KELVESITSYQQSIGWYNAPKHVCSEGDFRGLAFCCLPVKPCPVHAKFKKLGYTAEEFARTKLEFARGTMLEFGEDTCFG
SLVWCCKITKPCWIRDGVLNTIDLSDAEYMKLKEKLAKHILDNARIPVNESR
>Mature_372_residues
MYTGYVRFRNPIALAPMAGIADSAFANQYAGDAGLVVLGAFNLDNGSMEVASKLVARGRKEFISDEPLELIKQEIRAVNS
GSAVAVNVRSTNLEPLIEAAKLVKEEGAILELNAHCKQPEMLESGIGEALLHDLPRLSAWIKAIKETGVVLSVKVRANVV
NDVELARLIDKAGADIIHVDAMLEGFGADLDAISNYRDATRLFLIGNNSITDFAAAKEMFSRGADMVSVARGAMENSDLI
KELVESITSYQQSIGWYNAPKHVCSEGDFRGLAFCCLPVKPCPVHAKFKKLGYTAEEFARTKLEFARGTMLEFGEDTCFG
SLVWCCKITKPCWIRDGVLNTIDLSDAEYMKLKEKLAKHILDNARIPVNESR

Specific function: Unknown

COG id: COG0042

COG function: function code J; tRNA-dihydrouridine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017671 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40723; Mature: 40723

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTGYVRFRNPIALAPMAGIADSAFANQYAGDAGLVVLGAFNLDNGSMEVASKLVARGRK
CCCCEEEECCCEEECCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
EFISDEPLELIKQEIRAVNSGSAVAVNVRSTNLEPLIEAAKLVKEEGAILELNAHCKQPE
HHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCHH
MLESGIGEALLHDLPRLSAWIKAIKETGVVLSVKVRANVVNDVELARLIDKAGADIIHVD
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEHH
AMLEGFGADLDAISNYRDATRLFLIGNNSITDFAAAKEMFSRGADMVSVARGAMENSDLI
HHHHHCCCCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
KELVESITSYQQSIGWYNAPKHVCSEGDFRGLAFCCLPVKPCPVHAKFKKLGYTAEEFAR
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHH
TKLEFARGTMLEFGEDTCFGSLVWCCKITKPCWIRDGVLNTIDLSDAEYMKLKEKLAKHI
HHHHHHHCCHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCEEECCCHHHHHHHHHHHHHH
LDNARIPVNESR
HCCCCCCCCCCC
>Mature Secondary Structure
MYTGYVRFRNPIALAPMAGIADSAFANQYAGDAGLVVLGAFNLDNGSMEVASKLVARGRK
CCCCEEEECCCEEECCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
EFISDEPLELIKQEIRAVNSGSAVAVNVRSTNLEPLIEAAKLVKEEGAILELNAHCKQPE
HHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCHH
MLESGIGEALLHDLPRLSAWIKAIKETGVVLSVKVRANVVNDVELARLIDKAGADIIHVD
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEHH
AMLEGFGADLDAISNYRDATRLFLIGNNSITDFAAAKEMFSRGADMVSVARGAMENSDLI
HHHHHCCCCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
KELVESITSYQQSIGWYNAPKHVCSEGDFRGLAFCCLPVKPCPVHAKFKKLGYTAEEFAR
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHH
TKLEFARGTMLEFGEDTCFGSLVWCCKITKPCWIRDGVLNTIDLSDAEYMKLKEKLAKHI
HHHHHHHCCHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCEEECCCHHHHHHHHHHHHHH
LDNARIPVNESR
HCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]