| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227952
Identifier: 21227952
GI number: 21227952
Start: 2201306
End: 2201815
Strand: Direct
Name: 21227952
Synonym: MM_1850
Alternate gene names: NA
Gene position: 2201306-2201815 (Clockwise)
Preceding gene: 21227951
Following gene: 21227953
Centisome position: 53.74
GC content: 47.45
Gene sequence:
>510_bases TTGCAGCGACGGCATTCGGCTAAGCGTTACCAAAACCAACCGGGACGATTCCGGACTGCTCGTACTTCCCGATTTCCAAC TTGCACCCACGAGGATTCGCCGTTTCATCCACTCTCCCTGCGACCTCAGCTTATGGCATCATCGCATTTGCAGGGGATGG TTATCGTTTCTGTGCCAGGGCCCGGGCTCTCGCCCGACATCCTTTACAGATGTTCGTGTGTCCGGAGCGGTGGGGAGACT TTCCTCAGACCTGAAGGTCCGGCAGCCGTCCAGCCTCTCTCGCATGTTGTTGATTTCTGGCTCTATCTATTTTTTAAACC TATATATATTTATTGGATGATATTTCTACAGGTAAAAATGAACTTAAATGAACTCCCGATAAGAGTTTTTTGTCAACTGC CAATTAATTTTTCTGCCAGTTTCGGTCTTTTAAGCTCTGGATCGGACGGGGTCACTTCTTTCATCTGTTCTATATCATTC CTGTGTGCCGGATATGTTCCCAAATATTAA
Upstream 100 bases:
>100_bases ATAAAAAGGATATTGAGTGCGAGTGAGGCGTGTAAGCTCCCTTCTGTTACTGCAAAGCTTTCTTGCACCCAGCAGTGTAA GAAACGGTCCCTGAGGACTC
Downstream 100 bases:
>100_bases TATATAAGTATTATAATCGTGAAATAATATGTATTTCACATCCTCGAGAATTCTTTGAAATAAGTTCTCGTAAGCCTAAA AAGATTCGTTAGTTTAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MQRRHSAKRYQNQPGRFRTARTSRFPTCTHEDSPFHPLSLRPQLMASSHLQGMVIVSVPGPGLSPDILYRCSCVRSGGET FLRPEGPAAVQPLSHVVDFWLYLFFKPIYIYWMIFLQVKMNLNELPIRVFCQLPINFSASFGLLSSGSDGVTSFICSISF LCAGYVPKY
Sequences:
>Translated_169_residues MQRRHSAKRYQNQPGRFRTARTSRFPTCTHEDSPFHPLSLRPQLMASSHLQGMVIVSVPGPGLSPDILYRCSCVRSGGET FLRPEGPAAVQPLSHVVDFWLYLFFKPIYIYWMIFLQVKMNLNELPIRVFCQLPINFSASFGLLSSGSDGVTSFICSISF LCAGYVPKY >Mature_169_residues MQRRHSAKRYQNQPGRFRTARTSRFPTCTHEDSPFHPLSLRPQLMASSHLQGMVIVSVPGPGLSPDILYRCSCVRSGGET FLRPEGPAAVQPLSHVVDFWLYLFFKPIYIYWMIFLQVKMNLNELPIRVFCQLPINFSASFGLLSSGSDGVTSFICSISF LCAGYVPKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19128; Mature: 19128
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRHSAKRYQNQPGRFRTARTSRFPTCTHEDSPFHPLSLRPQLMASSHLQGMVIVSVPG CCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCC PGLSPDILYRCSCVRSGGETFLRPEGPAAVQPLSHVVDFWLYLFFKPIYIYWMIFLQVKM CCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NLNELPIRVFCQLPINFSASFGLLSSGSDGVTSFICSISFLCAGYVPKY CCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQRRHSAKRYQNQPGRFRTARTSRFPTCTHEDSPFHPLSLRPQLMASSHLQGMVIVSVPG CCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCC PGLSPDILYRCSCVRSGGETFLRPEGPAAVQPLSHVVDFWLYLFFKPIYIYWMIFLQVKM CCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NLNELPIRVFCQLPINFSASFGLLSSGSDGVTSFICSISFLCAGYVPKY CCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA