| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227940
Identifier: 21227940
GI number: 21227940
Start: 2189518
End: 2189715
Strand: Reverse
Name: 21227940
Synonym: MM_1838
Alternate gene names: NA
Gene position: 2189715-2189518 (Counterclockwise)
Preceding gene: 21227957
Following gene: 21227939
Centisome position: 53.46
GC content: 42.42
Gene sequence:
>198_bases ATGAAAATTTATATTGATGAAGAAAAATGTACAGGTTGCGGAGCATGTAAGGCTGCATGCCCTAAAGGCCCGAGGGTTTA CTCCATTGAAGAAAAAAAAGGTAAAAAGGTCTGTGTTGTAAAGGACCCTTCTTACTGTCTGGGGTGCAGGATGTGCACGA CTGTCTGCATGGCAGATGCAATTACCCTTGAAAACTAA
Upstream 100 bases:
>100_bases AAATAAATAGAAAATCATACTGAAAAGGATAGCAAAATATATTAAAACAAGAATATTATAAAATATTTGAAATAATACAA CCGGATGGAAAATAACCGGC
Downstream 100 bases:
>100_bases TTCTAAAAAATGCGTTCAGGATTGAGAAATTTGTCATTAAATATTCGAGTAGTGCTTGTAGAACCCATGTACCAGGGAAA TGTCGGATCTGTTGCAAGAG
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MKIYIDEEKCTGCGACKAACPKGPRVYSIEEKKGKKVCVVKDPSYCLGCRMCTTVCMADAITLEN
Sequences:
>Translated_65_residues MKIYIDEEKCTGCGACKAACPKGPRVYSIEEKKGKKVCVVKDPSYCLGCRMCTTVCMADAITLEN >Mature_65_residues MKIYIDEEKCTGCGACKAACPKGPRVYSIEEKKGKKVCVVKDPSYCLGCRMCTTVCMADAITLEN
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7086; Mature: 7086
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
13.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 18.5 %Cys+Met (Translated Protein) 13.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 18.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYIDEEKCTGCGACKAACPKGPRVYSIEEKKGKKVCVVKDPSYCLGCRMCTTVCMADA CEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCE ITLEN EEECC >Mature Secondary Structure MKIYIDEEKCTGCGACKAACPKGPRVYSIEEKKGKKVCVVKDPSYCLGCRMCTTVCMADA CEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCE ITLEN EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA