| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is MCM [H]
Identifier: 21227938
GI number: 21227938
Start: 2186497
End: 2188602
Strand: Reverse
Name: MCM [H]
Synonym: MM_1836
Alternate gene names: 21227938
Gene position: 2188602-2186497 (Counterclockwise)
Preceding gene: 21227939
Following gene: 21227937
Centisome position: 53.43
GC content: 47.25
Gene sequence:
>2106_bases ATGACTGAAACAGAAAGCAAATGGGACGAGAAATTAAAGAGATTCTTTAAAGATTATTACTGGAATGAAATCCTTCAGCT GGCAAACGAATACCCGGACCAGCGTAGCCTTGCAGTTGATTTCACGGATATAGAAAAATTTGACAGGGATCTTTCAAGGG AATTTCTTGAGCATCCCGGAGAACTTATATCCGCAGCTGAAGCCGCTCTGAAAGAAATTGACCTGCCTGTAGAAAAGAAC CTTGAGCAGGCCCATGTAAGGGTCATAAAAATTCCTAACAGGATTCCTATCAGGGAACTGAGAAGCAAACACCTCACACG TTTTGTTGCTATCGAGGGCATGATAAGAAAGGCAACAGAGGTCAGGCCAAGGATCACAAAAGCTGCCTTCCAGTGTTTAA GATGTGGGCACCTGACCATAGTGGAGCAGAACAGTTTCAAGTTCGAAGAGCCTTTTGCAGGATGTGAAGAGGAGACCTGC GGGAAGAAAGGGCCATTCAAGGTTTCAATTGAAGATTCAACTTTTATCGATGCCCAGAAACTACAGATCCAGGAGTCCCC GGAAAACCTGAAAGGAGGGTCGCAACCCCAGAGCCTGGAAGTGGACTCTGAAGATGACCTTACGGGGAATGTTACTCCGG GGGACCGTGTTATAATCAACGGAGTCCTGAAGTCAAGGCAGCGCACCCTCAAGGACGGGAAATCCACTTTCTACGACCTT ATACTGGAAGCGAATTCCATCGAGCGCCTGGACAAAGATTATGATGAGCTTGAAATATCTGCCGAAGAAGAGGAACAGAT CCTTGAGCTTTCCCGTGACCCGGCAATTTATGAAAAAATCATAAGCTCCATTGCGCCCTCTATTTACGGATACGAGGATA TCAAAGAAGCCCTTGCACTCCAGTTATTTTCAGGGGTTGTGAAGAACCTTCCTGACGGCTCGAGGACGAGGGGCGATATC CACATGATGCTTGTAGGTGACCCCGGAATTGCAAAAAGCCAGCTTCTCCGTTATGTTGTCAAACTATCTCCAAGAGGCGT CTTTGCTTCAGGGAGGAGCGCGTCTGCGAGCGGTTTGACTGCGGCTGCCGTAAAAGACGACATGAACGACGGCAGGTGGA CGATAGAAGGCGGAGCACTTGTCATGGCTGATATGGGAGTTGCTGCAGTTGACGAAATGGACAAGATGAGGACAGAGGAC AAGAGTGCCCTCCACGAGGCAATGGAACAGCAGACCATAAGCATAGCCAAAGCAGGGATTATTGCAACTTTAAAGTCCAG GTGTGCCCTTCTTGGAGCTGCAAATCCGAAATACGGCCGCTTTGACCGGTATGAAGGGCTTGCAGATCAAATAAATATGC CTCCGGCTCTGCTTTCTCGTTTCGACCTGATCTTCGTTTTGCTCGATACCCCAAACCATTCCCTGGACAGCAGGATAGCA AACCACATTCTGCAGTCGCATTATGCGGGAGAACTCTCCGAGCAAAGGCAAAAACTTCCAGGGTCTACAATTTCTGAAGA ATTTGTTGATGCTGAAATGGAAATAATTGAGCCTGTTATTGCACCGGAATTTATGCGGAAGTATATCGCATTTGCACGAA AAAATGTTTATCCGGTAATGGAAGAAGATACAAGACATCACCTTATTAACTTTTATACGGACCTCAGGAGAAGCGGAGAA GGCAAGAATACGCCCGTGCCCGTAACAGCCAGGCAGCTCGAAGCGCTGGTTCGCCTCTCCGAAGCCAGTGCACGTGTCCG CCTCAGTAATATAGTCACCCTTGAGGACGCAAAACGGACCATCAGAATAGTAATGAACTGCCTTAAAAACGTAGGAGTCG ATCCAGAAACAGGAGCTCTTGACGCAGACATACTTGCTTCGGGTACAAGCATGAGCCAGAGGAATAAAATAAAACTCCTC AAAGACATAATAAAAAAAGTCAGTGATAGACACCCGGGTTCCAAAGCTCCTCTTGAAGAGGTCTATGCAGAGGCTGAAAG CGAGCACGGCATAGATAGAGGACATGCAGAGGAATACATAAAGAAGATGAAACAGAGAGGCGACATTCTTTCTCCGGACC AGACCCATATCAGGCTCATTAATTAA
Upstream 100 bases:
>100_bases TATATCTTATACGTTTTTTTACTTTTTTAAAATCGTTTTCATGTAAAAACAACCTGATCGAAGATAGAAATTTTCATAAA AGCCAACTTTTGAGAATGTT
Downstream 100 bases:
>100_bases GTCAAAAAACAGCGGATTCTCGCAACTGAAACTGTTACTGTACACCAGGAAGCTCCCGAAGGAAAAAACAGTGTACCCGC AAACAAAATAATGATGGTTA
Product: cell division control protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 701; Mature: 700
Protein sequence:
>701_residues MTETESKWDEKLKRFFKDYYWNEILQLANEYPDQRSLAVDFTDIEKFDRDLSREFLEHPGELISAAEAALKEIDLPVEKN LEQAHVRVIKIPNRIPIRELRSKHLTRFVAIEGMIRKATEVRPRITKAAFQCLRCGHLTIVEQNSFKFEEPFAGCEEETC GKKGPFKVSIEDSTFIDAQKLQIQESPENLKGGSQPQSLEVDSEDDLTGNVTPGDRVIINGVLKSRQRTLKDGKSTFYDL ILEANSIERLDKDYDELEISAEEEEQILELSRDPAIYEKIISSIAPSIYGYEDIKEALALQLFSGVVKNLPDGSRTRGDI HMMLVGDPGIAKSQLLRYVVKLSPRGVFASGRSASASGLTAAAVKDDMNDGRWTIEGGALVMADMGVAAVDEMDKMRTED KSALHEAMEQQTISIAKAGIIATLKSRCALLGAANPKYGRFDRYEGLADQINMPPALLSRFDLIFVLLDTPNHSLDSRIA NHILQSHYAGELSEQRQKLPGSTISEEFVDAEMEIIEPVIAPEFMRKYIAFARKNVYPVMEEDTRHHLINFYTDLRRSGE GKNTPVPVTARQLEALVRLSEASARVRLSNIVTLEDAKRTIRIVMNCLKNVGVDPETGALDADILASGTSMSQRNKIKLL KDIIKKVSDRHPGSKAPLEEVYAEAESEHGIDRGHAEEYIKKMKQRGDILSPDQTHIRLIN
Sequences:
>Translated_701_residues MTETESKWDEKLKRFFKDYYWNEILQLANEYPDQRSLAVDFTDIEKFDRDLSREFLEHPGELISAAEAALKEIDLPVEKN LEQAHVRVIKIPNRIPIRELRSKHLTRFVAIEGMIRKATEVRPRITKAAFQCLRCGHLTIVEQNSFKFEEPFAGCEEETC GKKGPFKVSIEDSTFIDAQKLQIQESPENLKGGSQPQSLEVDSEDDLTGNVTPGDRVIINGVLKSRQRTLKDGKSTFYDL ILEANSIERLDKDYDELEISAEEEEQILELSRDPAIYEKIISSIAPSIYGYEDIKEALALQLFSGVVKNLPDGSRTRGDI HMMLVGDPGIAKSQLLRYVVKLSPRGVFASGRSASASGLTAAAVKDDMNDGRWTIEGGALVMADMGVAAVDEMDKMRTED KSALHEAMEQQTISIAKAGIIATLKSRCALLGAANPKYGRFDRYEGLADQINMPPALLSRFDLIFVLLDTPNHSLDSRIA NHILQSHYAGELSEQRQKLPGSTISEEFVDAEMEIIEPVIAPEFMRKYIAFARKNVYPVMEEDTRHHLINFYTDLRRSGE GKNTPVPVTARQLEALVRLSEASARVRLSNIVTLEDAKRTIRIVMNCLKNVGVDPETGALDADILASGTSMSQRNKIKLL KDIIKKVSDRHPGSKAPLEEVYAEAESEHGIDRGHAEEYIKKMKQRGDILSPDQTHIRLIN >Mature_700_residues TETESKWDEKLKRFFKDYYWNEILQLANEYPDQRSLAVDFTDIEKFDRDLSREFLEHPGELISAAEAALKEIDLPVEKNL EQAHVRVIKIPNRIPIRELRSKHLTRFVAIEGMIRKATEVRPRITKAAFQCLRCGHLTIVEQNSFKFEEPFAGCEEETCG KKGPFKVSIEDSTFIDAQKLQIQESPENLKGGSQPQSLEVDSEDDLTGNVTPGDRVIINGVLKSRQRTLKDGKSTFYDLI LEANSIERLDKDYDELEISAEEEEQILELSRDPAIYEKIISSIAPSIYGYEDIKEALALQLFSGVVKNLPDGSRTRGDIH MMLVGDPGIAKSQLLRYVVKLSPRGVFASGRSASASGLTAAAVKDDMNDGRWTIEGGALVMADMGVAAVDEMDKMRTEDK SALHEAMEQQTISIAKAGIIATLKSRCALLGAANPKYGRFDRYEGLADQINMPPALLSRFDLIFVLLDTPNHSLDSRIAN HILQSHYAGELSEQRQKLPGSTISEEFVDAEMEIIEPVIAPEFMRKYIAFARKNVYPVMEEDTRHHLINFYTDLRRSGEG KNTPVPVTARQLEALVRLSEASARVRLSNIVTLEDAKRTIRIVMNCLKNVGVDPETGALDADILASGTSMSQRNKIKLLK DIIKKVSDRHPGSKAPLEEVYAEAESEHGIDRGHAEEYIKKMKQRGDILSPDQTHIRLIN
Specific function: Has ATPase and DNA helicase activities. The latter preferentially melts 5'-tailed oligonucleotides and is stimulated by the SSB protein (single-stranded DNA binding protein) [H]
COG id: COG1241
COG function: function code L; Predicted ATPase involved in replication control, Cdc46/Mcm family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MCM domain [H]
Homologues:
Organism=Homo sapiens, GI33469919, Length=630, Percent_Identity=35.7142857142857, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI33469917, Length=630, Percent_Identity=35.7142857142857, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI33356547, Length=580, Percent_Identity=33.9655172413793, Blast_Score=348, Evalue=1e-95, Organism=Homo sapiens, GI23510448, Length=628, Percent_Identity=33.2802547770701, Blast_Score=324, Evalue=2e-88, Organism=Homo sapiens, GI33469968, Length=660, Percent_Identity=33.6363636363636, Blast_Score=322, Evalue=8e-88, Organism=Homo sapiens, GI7427519, Length=660, Percent_Identity=32.7272727272727, Blast_Score=316, Evalue=5e-86, Organism=Homo sapiens, GI19923727, Length=675, Percent_Identity=30.962962962963, Blast_Score=302, Evalue=7e-82, Organism=Homo sapiens, GI6631095, Length=630, Percent_Identity=32.8571428571429, Blast_Score=299, Evalue=6e-81, Organism=Homo sapiens, GI33469922, Length=488, Percent_Identity=38.5245901639344, Blast_Score=298, Evalue=2e-80, Organism=Homo sapiens, GI33469924, Length=661, Percent_Identity=31.3161875945537, Blast_Score=296, Evalue=3e-80, Organism=Homo sapiens, GI310128402, Length=277, Percent_Identity=35.7400722021661, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI310119838, Length=277, Percent_Identity=35.7400722021661, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI310115110, Length=277, Percent_Identity=35.7400722021661, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI23397546, Length=394, Percent_Identity=24.8730964467005, Blast_Score=136, Evalue=8e-32, Organism=Caenorhabditis elegans, GI17554306, Length=612, Percent_Identity=35.7843137254902, Blast_Score=357, Evalue=1e-98, Organism=Caenorhabditis elegans, GI71997752, Length=589, Percent_Identity=33.276740237691, Blast_Score=353, Evalue=2e-97, Organism=Caenorhabditis elegans, GI17508417, Length=642, Percent_Identity=32.8660436137072, Blast_Score=351, Evalue=1e-96, Organism=Caenorhabditis elegans, GI17562700, Length=551, Percent_Identity=36.2976406533575, Blast_Score=309, Evalue=3e-84, Organism=Caenorhabditis elegans, GI17562702, Length=512, Percent_Identity=33.984375, Blast_Score=298, Evalue=1e-80, Organism=Caenorhabditis elegans, GI71997563, Length=629, Percent_Identity=31.7965023847377, Blast_Score=288, Evalue=8e-78, Organism=Caenorhabditis elegans, GI71997571, Length=357, Percent_Identity=40.0560224089636, Blast_Score=230, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6325276, Length=638, Percent_Identity=33.5423197492163, Blast_Score=363, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6319448, Length=558, Percent_Identity=37.4551971326165, Blast_Score=356, Evalue=7e-99, Organism=Saccharomyces cerevisiae, GI6323304, Length=696, Percent_Identity=32.4712643678161, Blast_Score=329, Evalue=1e-90, Organism=Saccharomyces cerevisiae, GI6319679, Length=540, Percent_Identity=35.9259259259259, Blast_Score=311, Evalue=3e-85, Organism=Saccharomyces cerevisiae, GI6320803, Length=712, Percent_Identity=31.7415730337079, Blast_Score=302, Evalue=1e-82, Organism=Saccharomyces cerevisiae, GI6321237, Length=357, Percent_Identity=40.8963585434174, Blast_Score=274, Evalue=4e-74, Organism=Drosophila melanogaster, GI17137242, Length=683, Percent_Identity=32.6500732064422, Blast_Score=360, Evalue=2e-99, Organism=Drosophila melanogaster, GI17137132, Length=614, Percent_Identity=31.5960912052117, Blast_Score=332, Evalue=8e-91, Organism=Drosophila melanogaster, GI17530827, Length=626, Percent_Identity=33.5463258785943, Blast_Score=328, Evalue=6e-90, Organism=Drosophila melanogaster, GI24645774, Length=646, Percent_Identity=33.9009287925697, Blast_Score=328, Evalue=9e-90, Organism=Drosophila melanogaster, GI24639835, Length=537, Percent_Identity=37.8026070763501, Blast_Score=320, Evalue=2e-87, Organism=Drosophila melanogaster, GI17647617, Length=552, Percent_Identity=34.963768115942, Blast_Score=304, Evalue=2e-82, Organism=Drosophila melanogaster, GI24647251, Length=575, Percent_Identity=24.5217391304348, Blast_Score=166, Evalue=5e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR001208 - InterPro: IPR012340 - InterPro: IPR016027 [H]
Pfam domain/function: PF00493 MCM [H]
EC number: NA
Molecular weight: Translated: 78714; Mature: 78582
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS50051 MCM_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETESKWDEKLKRFFKDYYWNEILQLANEYPDQRSLAVDFTDIEKFDRDLSREFLEHPG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCHH ELISAAEAALKEIDLPVEKNLEQAHVRVIKIPNRIPIRELRSKHLTRFVAIEGMIRKATE HHHHHHHHHHHHCCCCHHCCHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VRPRITKAAFQCLRCGHLTIVEQNSFKFEEPFAGCEEETCGKKGPFKVSIEDSTFIDAQK HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCEECHHH LQIQESPENLKGGSQPQSLEVDSEDDLTGNVTPGDRVIINGVLKSRQRTLKDGKSTFYDL HEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILEANSIERLDKDYDELEISAEEEEQILELSRDPAIYEKIISSIAPSIYGYEDIKEALAL HHCCHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHCCHHHHHHHHHH QLFSGVVKNLPDGSRTRGDIHMMLVGDPGIAKSQLLRYVVKLSPRGVFASGRSASASGLT HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCC AAAVKDDMNDGRWTIEGGALVMADMGVAAVDEMDKMRTEDKSALHEAMEQQTISIAKAGI HHHHHCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATLKSRCALLGAANPKYGRFDRYEGLADQINMPPALLSRFDLIFVLLDTPNHSLDSRIA HHHHHHHHHHHCCCCCCCCCCHHHCCCHHHCCCCHHHHHHHCEEEEEECCCCCCHHHHHH NHILQSHYAGELSEQRQKLPGSTISEEFVDAEMEIIEPVIAPEFMRKYIAFARKNVYPVM HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCC EEDTRHHLINFYTDLRRSGEGKNTPVPVTARQLEALVRLSEASARVRLSNIVTLEDAKRT CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEHHHEEEHHHHHHH IRIVMNCLKNVGVDPETGALDADILASGTSMSQRNKIKLLKDIIKKVSDRHPGSKAPLEE HHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH VYAEAESEHGIDRGHAEEYIKKMKQRGDILSPDQTHIRLIN HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEC >Mature Secondary Structure TETESKWDEKLKRFFKDYYWNEILQLANEYPDQRSLAVDFTDIEKFDRDLSREFLEHPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCHH ELISAAEAALKEIDLPVEKNLEQAHVRVIKIPNRIPIRELRSKHLTRFVAIEGMIRKATE HHHHHHHHHHHHCCCCHHCCHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VRPRITKAAFQCLRCGHLTIVEQNSFKFEEPFAGCEEETCGKKGPFKVSIEDSTFIDAQK HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCEECHHH LQIQESPENLKGGSQPQSLEVDSEDDLTGNVTPGDRVIINGVLKSRQRTLKDGKSTFYDL HEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILEANSIERLDKDYDELEISAEEEEQILELSRDPAIYEKIISSIAPSIYGYEDIKEALAL HHCCHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHCCHHHHHHHHHH QLFSGVVKNLPDGSRTRGDIHMMLVGDPGIAKSQLLRYVVKLSPRGVFASGRSASASGLT HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCC AAAVKDDMNDGRWTIEGGALVMADMGVAAVDEMDKMRTEDKSALHEAMEQQTISIAKAGI HHHHHCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATLKSRCALLGAANPKYGRFDRYEGLADQINMPPALLSRFDLIFVLLDTPNHSLDSRIA HHHHHHHHHHHCCCCCCCCCCHHHCCCHHHCCCCHHHHHHHCEEEEEECCCCCCHHHHHH NHILQSHYAGELSEQRQKLPGSTISEEFVDAEMEIIEPVIAPEFMRKYIAFARKNVYPVM HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCC EEDTRHHLINFYTDLRRSGEGKNTPVPVTARQLEALVRLSEASARVRLSNIVTLEDAKRT CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEHHHEEEHHHHHHH IRIVMNCLKNVGVDPETGALDADILASGTSMSQRNKIKLLKDIIKKVSDRHPGSKAPLEE HHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH VYAEAESEHGIDRGHAEEYIKKMKQRGDILSPDQTHIRLIN HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10701121; 11427726 [H]