Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227932

Identifier: 21227932

GI number: 21227932

Start: 2181652

End: 2182230

Strand: Direct

Name: 21227932

Synonym: MM_1830

Alternate gene names: NA

Gene position: 2181652-2182230 (Clockwise)

Preceding gene: 21227931

Following gene: 21227933

Centisome position: 53.26

GC content: 42.49

Gene sequence:

>579_bases
ATGAAATTCATTTCAGCTCTTTTTTTTTCAATCCCGGTCATTTTTATATTTTCAATTCTCATTGCCTGTGCAGTCTCTCC
CACCGCAGGAGCATCTAATGGGAGGCTTTCGATTATTCTAATTGATGGGGACGAGATTTATGTACGCTCAGGTGACTATT
ACTCTTTGTTGCAGGATTATCAGCTCCACGTAAAAGGCGCTAATTCTGAAGGCAACAGGGTATGGATCGAACTGTGCAGA
GACGACACTTCTATTGAAGACGCTATTGTCGGCGAGGGTGACACTTTTATATATTCTAATAATTCTACGGAGATTTTGAA
CCTCACAGTGGAGAAAATATACGGCGGAGCGGATGGAGTGCTGGTAAAGTTCTCTCCTGTATATCAGTACCTTAACCCCC
GACTTCCCATGCCTCAGACACCGGTAACTACACCTGATAACCACTCCAACAATAATTCTTCTCCTCCTCCGGTATTTGAA
AATCAGGCAAAAGGTTTTGACATGCCCATTTTACTTCTGAGCATGGGGGCTGTTCTTCTGGTAAGCGGGATTTTTGCAGG
AATTTATAAGAAAAAGTAA

Upstream 100 bases:

>100_bases
CTTATCATAAGGAAGGCAGATAATACTAAGGAAGAAATTATTGCAGGTAGATGCATTTATGCGCGTCCCAAATAAATGCG
AAAAAAAGAGCAGTAAAGGA

Downstream 100 bases:

>100_bases
TAGTAGATTATATGAAAAAAACTGATCAGTAATAGTAGAATATGTGGATGAAAAATCGATTAGTATAGAAGAATATGTAA
GAAAAGCCGATTCTGTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKFISALFFSIPVIFIFSILIACAVSPTAGASNGRLSIILIDGDEIYVRSGDYYSLLQDYQLHVKGANSEGNRVWIELCR
DDTSIEDAIVGEGDTFIYSNNSTEILNLTVEKIYGGADGVLVKFSPVYQYLNPRLPMPQTPVTTPDNHSNNNSSPPPVFE
NQAKGFDMPILLLSMGAVLLVSGIFAGIYKKK

Sequences:

>Translated_192_residues
MKFISALFFSIPVIFIFSILIACAVSPTAGASNGRLSIILIDGDEIYVRSGDYYSLLQDYQLHVKGANSEGNRVWIELCR
DDTSIEDAIVGEGDTFIYSNNSTEILNLTVEKIYGGADGVLVKFSPVYQYLNPRLPMPQTPVTTPDNHSNNNSSPPPVFE
NQAKGFDMPILLLSMGAVLLVSGIFAGIYKKK
>Mature_192_residues
MKFISALFFSIPVIFIFSILIACAVSPTAGASNGRLSIILIDGDEIYVRSGDYYSLLQDYQLHVKGANSEGNRVWIELCR
DDTSIEDAIVGEGDTFIYSNNSTEILNLTVEKIYGGADGVLVKFSPVYQYLNPRLPMPQTPVTTPDNHSNNNSSPPPVFE
NQAKGFDMPILLLSMGAVLLVSGIFAGIYKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21019; Mature: 21019

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFISALFFSIPVIFIFSILIACAVSPTAGASNGRLSIILIDGDEIYVRSGDYYSLLQDY
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHCE
QLHVKGANSEGNRVWIELCRDDTSIEDAIVGEGDTFIYSNNSTEILNLTVEKIYGGADGV
EEEEEECCCCCCEEEEEEECCCCCCCCEEECCCCEEEEECCCCEEEEEEEEHHCCCCCCE
LVKFSPVYQYLNPRLPMPQTPVTTPDNHSNNNSSPPPVFENQAKGFDMPILLLSMGAVLL
EEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VSGIFAGIYKKK
HHHHHHHHHCCC
>Mature Secondary Structure
MKFISALFFSIPVIFIFSILIACAVSPTAGASNGRLSIILIDGDEIYVRSGDYYSLLQDY
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHCE
QLHVKGANSEGNRVWIELCRDDTSIEDAIVGEGDTFIYSNNSTEILNLTVEKIYGGADGV
EEEEEECCCCCCEEEEEEECCCCCCCCEEECCCCEEEEECCCCEEEEEEEEHHCCCCCCE
LVKFSPVYQYLNPRLPMPQTPVTTPDNHSNNNSSPPPVFENQAKGFDMPILLLSMGAVLL
EEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
VSGIFAGIYKKK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA