| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227926
Identifier: 21227926
GI number: 21227926
Start: 2174919
End: 2175191
Strand: Direct
Name: 21227926
Synonym: MM_1824
Alternate gene names: NA
Gene position: 2174919-2175191 (Clockwise)
Preceding gene: 21227925
Following gene: 21227928
Centisome position: 53.09
GC content: 45.42
Gene sequence:
>273_bases GTGACTCTAATGGCAAAGGCAGATAAAAAAAACAAAAAGATAGTTCAGTCTGAAAAGTGTATTGGGTGCGGGATATGCTA TTCCGTCTGCCCTGTGAACGCAAAAGCAATGAAAAGCGATGACTTTGATCCCGAAACTGCCGAACTTGCACTCCGGATCA TTGATGGAATGGCAATAATTGATGACGAAATCTGCATCCGCTGCGGGGCTTGCTCAAAGAATTGTCCTGTGGAATCCCTC GCAGTAGTTGAGGTTGAAGCCGCAACTGCATAA
Upstream 100 bases:
>100_bases ACAAATATAAATTTCTCTTTATATTTGCAGCCAGCCCTGTTTTTACAGCTTCTCATACGGCTTATTCCCCGTTGTCTGGC AATTCTATCGTATTTTTGAG
Downstream 100 bases:
>100_bases CCAGTCTCAGGTAAAAATAGGTAAAATGCTGTTTTTCAGCATTTTTCAGTTCTTTTTATTATCCAGCAGAATTATTTACA GCATTTCTTTAGCTAGTTTT
Product: ferredoxin
Products: CO2; methanofuran; reduced acceptor
Alternate protein names: Formylmethanofuran Dehydrogenase Subunit G
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MTLMAKADKKNKKIVQSEKCIGCGICYSVCPVNAKAMKSDDFDPETAELALRIIDGMAIIDDEICIRCGACSKNCPVESL AVVEVEAATA
Sequences:
>Translated_90_residues MTLMAKADKKNKKIVQSEKCIGCGICYSVCPVNAKAMKSDDFDPETAELALRIIDGMAIIDDEICIRCGACSKNCPVESL AVVEVEAATA >Mature_89_residues TLMAKADKKNKKIVQSEKCIGCGICYSVCPVNAKAMKSDDFDPETAELALRIIDGMAIIDDEICIRCGACSKNCPVESLA VVEVEAATA
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.2.99.5
Molecular weight: Translated: 9600; Mature: 9469
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 13.3 %Cys+Met (Translated Protein) 9.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 12.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLMAKADKKNKKIVQSEKCIGCGICYSVCPVNAKAMKSDDFDPETAELALRIIDGMAII CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEE DDEICIRCGACSKNCPVESLAVVEVEAATA CCCEEEEECCCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure TLMAKADKKNKKIVQSEKCIGCGICYSVCPVNAKAMKSDDFDPETAELALRIIDGMAII CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEE DDEICIRCGACSKNCPVESLAVVEVEAATA CCCEEEEECCCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formylmethanofuran; H2O; acceptor
Specific reaction: formylmethanofuran + H2O + acceptor = CO2 + methanofuran + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA