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The map label for this gene is 21227915

Identifier: 21227915

GI number: 21227915

Start: 2162571

End: 2163794

Strand: Direct

Name: 21227915

Synonym: MM_1813

Alternate gene names: NA

Gene position: 2162571-2163794 (Clockwise)

Preceding gene: 21227914

Following gene: 21227916

Centisome position: 52.79

GC content: 49.18

Gene sequence:

>1224_bases
ATGAAACAGGATATGTCAAGTGCAGACGTTGCTGCGGTTGTTGCCGAACTGTCAGCGGGTCCCAGGTCCATTATTGATGC
GAAGATAGGGAAGATCTACCAGCCAGCCAGCGAGGAGATACGCATCAACCTTTACGTTTTTCACCAGGGAAGGGACAACC
TGGTTATTGAGGCGGGAAAGCGCCTCCATATGACAAAACACATCCGGCCAAGCCCCACTCTTCCTCAGGCTTTCCCCATG
CTTCTGAGAAAATACCTGATGGGAGGCAGGATCGTATCCGTCGAGCAGCACGACTTCGACAGGATCGTAAAAATAGGGAT
TGAGAGAGCTGGAGTCAGAAGCACACTCATTGTTGAACTGTTTGCGCGAGGCAATGTCCTGATAGTGGATTCGGAAAACA
AAATCATCCTGCCCATGAACCCCGTAACCCTCAAGGACCGCAGGCTCAGGAGCGGAGAAATTTACGAGCTTCCGGAGGCG
CAGTTGAGCCCCATCGAGGCTAAGGTTTCCGACCTTATGGACGCATTTTCTAAATCAACGGCTGATATAGTCCGGACTAT
TGCTACAAGGTTCAACCTCGGAGGAGTCCTGGCAGAAGAAGCCTGTGCACGCGCAGGAATAAACAAGTCCAGGCCTGCAA
AAGAAGCTACAGTAGAGGATGCTGAAAAGCTGCGTGAGGCGCTTCAGGACCTTTTTTCCCCTCTATTCAGAGCGAGGGAC
GCTGCCAGAACTGAAGGCGAGCCTGAAGGCGGTGCTGAAATTGAAGACAGGCCCGGAGCAGAAACCGGACCTCTTATTCC
GGGGCTCAGGCCTCAGCATATAAAGCAGGAAATTAATGGGAAAATGGAAACCTTCGATGTAGTGCCTTTTGACCTTAACC
GTTATTCAGAATACGAAAAAGAATATTTCGATTCCTTTAATACTGCACTTGATGAGTTTTTCGGGAAAAAGGCTCTTGAG
CAGGTGGCAGAGGTAAAGGAAGCCGAAAAGAAGGAAAAAACGCTCGGGGTCTTTGAAAGGCGGCTCATGCAGCAGGAAGA
GAGCCTTGCAAAGTTCGAAAAGGAAATTGAGAAAAACAATGCCCTTGCAGAAACCGTATATGCCAATTACCAGATTATCG
AAGAGCTTTTTTCAGTACTTAACGGAGCAAGGGCAAAAGGTTATTCCTGGGATGAAATTCGCTCCATCCTGAAACAGGCA
AAAAAGACCGTTCCTGCAGCCTAG

Upstream 100 bases:

>100_bases
ACGGAACTCGGGTGGCGCAACTCGGGCGATTAAAATCTGACTACTGTAAAAAGAATTCTACAGTAACACTTATACATGAA
TCCTCTCTTATATCCACTTC

Downstream 100 bases:

>100_bases
ACAATTACTAATATTGACCAGAAAACCGGAACTGTAACTGTCAATCTCGACGGAAAGAGCATAAATCTTGATATCCGGAA
GACTGTGCCTCAGAATGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKQDMSSADVAAVVAELSAGPRSIIDAKIGKIYQPASEEIRINLYVFHQGRDNLVIEAGKRLHMTKHIRPSPTLPQAFPM
LLRKYLMGGRIVSVEQHDFDRIVKIGIERAGVRSTLIVELFARGNVLIVDSENKIILPMNPVTLKDRRLRSGEIYELPEA
QLSPIEAKVSDLMDAFSKSTADIVRTIATRFNLGGVLAEEACARAGINKSRPAKEATVEDAEKLREALQDLFSPLFRARD
AARTEGEPEGGAEIEDRPGAETGPLIPGLRPQHIKQEINGKMETFDVVPFDLNRYSEYEKEYFDSFNTALDEFFGKKALE
QVAEVKEAEKKEKTLGVFERRLMQQEESLAKFEKEIEKNNALAETVYANYQIIEELFSVLNGARAKGYSWDEIRSILKQA
KKTVPAA

Sequences:

>Translated_407_residues
MKQDMSSADVAAVVAELSAGPRSIIDAKIGKIYQPASEEIRINLYVFHQGRDNLVIEAGKRLHMTKHIRPSPTLPQAFPM
LLRKYLMGGRIVSVEQHDFDRIVKIGIERAGVRSTLIVELFARGNVLIVDSENKIILPMNPVTLKDRRLRSGEIYELPEA
QLSPIEAKVSDLMDAFSKSTADIVRTIATRFNLGGVLAEEACARAGINKSRPAKEATVEDAEKLREALQDLFSPLFRARD
AARTEGEPEGGAEIEDRPGAETGPLIPGLRPQHIKQEINGKMETFDVVPFDLNRYSEYEKEYFDSFNTALDEFFGKKALE
QVAEVKEAEKKEKTLGVFERRLMQQEESLAKFEKEIEKNNALAETVYANYQIIEELFSVLNGARAKGYSWDEIRSILKQA
KKTVPAA
>Mature_407_residues
MKQDMSSADVAAVVAELSAGPRSIIDAKIGKIYQPASEEIRINLYVFHQGRDNLVIEAGKRLHMTKHIRPSPTLPQAFPM
LLRKYLMGGRIVSVEQHDFDRIVKIGIERAGVRSTLIVELFARGNVLIVDSENKIILPMNPVTLKDRRLRSGEIYELPEA
QLSPIEAKVSDLMDAFSKSTADIVRTIATRFNLGGVLAEEACARAGINKSRPAKEATVEDAEKLREALQDLFSPLFRARD
AARTEGEPEGGAEIEDRPGAETGPLIPGLRPQHIKQEINGKMETFDVVPFDLNRYSEYEKEYFDSFNTALDEFFGKKALE
QVAEVKEAEKKEKTLGVFERRLMQQEESLAKFEKEIEKNNALAETVYANYQIIEELFSVLNGARAKGYSWDEIRSILKQA
KKTVPAA

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32130516, Length=410, Percent_Identity=25.609756097561, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI32565397, Length=439, Percent_Identity=22.3234624145786, Blast_Score=78, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6325248, Length=110, Percent_Identity=34.5454545454545, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281362530, Length=438, Percent_Identity=23.972602739726, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281362528, Length=438, Percent_Identity=23.972602739726, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616
- InterPro:   IPR010979 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 45652; Mature: 45652

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQDMSSADVAAVVAELSAGPRSIIDAKIGKIYQPASEEIRINLYVFHQGRDNLVIEAGK
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEECCC
RLHMTKHIRPSPTLPQAFPMLLRKYLMGGRIVSVEQHDFDRIVKIGIERAGVRSTLIVEL
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHH
FARGNVLIVDSENKIILPMNPVTLKDRRLRSGEIYELPEAQLSPIEAKVSDLMDAFSKST
HHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH
ADIVRTIATRFNLGGVLAEEACARAGINKSRPAKEATVEDAEKLREALQDLFSPLFRARD
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARTEGEPEGGAEIEDRPGAETGPLIPGLRPQHIKQEINGKMETFDVVPFDLNRYSEYEK
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
EYFDSFNTALDEFFGKKALEQVAEVKEAEKKEKTLGVFERRLMQQEESLAKFEKEIEKNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ALAETVYANYQIIEELFSVLNGARAKGYSWDEIRSILKQAKKTVPAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQDMSSADVAAVVAELSAGPRSIIDAKIGKIYQPASEEIRINLYVFHQGRDNLVIEAGK
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEECCC
RLHMTKHIRPSPTLPQAFPMLLRKYLMGGRIVSVEQHDFDRIVKIGIERAGVRSTLIVEL
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHH
FARGNVLIVDSENKIILPMNPVTLKDRRLRSGEIYELPEAQLSPIEAKVSDLMDAFSKST
HHCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHH
ADIVRTIATRFNLGGVLAEEACARAGINKSRPAKEATVEDAEKLREALQDLFSPLFRARD
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARTEGEPEGGAEIEDRPGAETGPLIPGLRPQHIKQEINGKMETFDVVPFDLNRYSEYEK
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
EYFDSFNTALDEFFGKKALEQVAEVKEAEKKEKTLGVFERRLMQQEESLAKFEKEIEKNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ALAETVYANYQIIEELFSVLNGARAKGYSWDEIRSILKQAKKTVPAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]