Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227896

Identifier: 21227896

GI number: 21227896

Start: 2141417

End: 2143972

Strand: Direct

Name: 21227896

Synonym: MM_1794

Alternate gene names: NA

Gene position: 2141417-2143972 (Clockwise)

Preceding gene: 21227895

Following gene: 21227899

Centisome position: 52.28

GC content: 47.69

Gene sequence:

>2556_bases
ATGGCACATAGAGATAATCCAGAATTTTTATCGGCAAGCACTATAAAAGGGGACAAGGTCGTCAATACTGCTGGAGAAGA
CCTTGGAAAGATTGAAGAATTGATGATCGACGTCGATGACGGAAGAATAGCGTATGCGGCATTGTCTTTTGGCGGGTTCC
TGGGTATGGGAAACAAACTATTTGCCATTCCCTGGCAGGCTTTAAAACTCAGGCTTCACGAACATACCTTCTTACTTGAT
ATTCCTAAAGAAACACTTGAGAGAGCGGAAGGCTTTGATAAGGACAACTGGCCTGCAGCTGACCGTGAATGGCTCTCCGA
TACTTACACTTACTACGGATACCAGCCATACTGGCAAAGAAGGGCAGAGGAGCAGACCGAAATACGGGGCGAGGTAGGTG
CAGAAAGGTTATCAAGAGAATCAGCCAGCGAGAACCCCATATTCCTGTCAGCAGATTCCATAAAAGGAAATAAAGTTGTC
AATAGGGATGGGAATGATATTGGAAAGATCGACGAAATAATGATCGATCTGCAGGATGGAAATGTGGCATATGCCGCAGT
ATCACATGGCGGGATCCTTGGTATAGGCAGCAAATTGTTTGCTATTCCCTGGAAGGCTTTTTCCCTTAGAATCCGTGATA
ATGCCTTCATACTTGACATTCCTGAAGAGACCTTTGATAAGGCAGAAGGTTTCGACAAGAGTCACTGGCCTCTAACCCGT
CAGGAACTTTCCGGGACTTTCACGCACTATGGGTTTGAACCTTACTGGCAGGCAGCGGCAGTGGGGGCAGGCGTTTCGGC
AGGAGTCATGGGTGAGACTGAAGCAGAAAAGATGTCCCGGATGGAAAGAGAGAGGAAAGGGTTGGTAAAAACAGATGAAG
AGTTAAAGGCAAGACAGGAAAGGGAAAGACTTGAAGGGTTAAAAGAGACGCAGGAAGAAAAAATCTCCCGTCTGGAACAG
GAACGTATGGAACGGGAGAGGCAGACAGAAACTGAACGAGAAAGACTCTCGCGCCTGGAAAAAGAACAGATGGAACTTGA
AAATCAGTCACGGGTTGAGAAAGAGAAGCTTGCAGGGCTGGAAAAAGAACTTCAGGAATCTATCAGGCTCGAAGAGACTG
AAAAAGTATCCAGGCTTGAGAAAGAGGTGAATCTTTTACAGGGGCAGGAACAGTCCCGCAGAGAGAGACTGGCACAGCTG
GAGAGTGAGCGTGCAAGAGTGGGGAAGCTGGAAGAGACCGAAAAAGAGAGGCTCGCCAGGCTTGAAAAAGAGAGGATGGA
AGCCGAGAGGCGTGAAGAAAGTGAGAAAGAACGGCTTGCCCGCCTGGAAAAGGAGAGGATGGAAGCTGAAAGAAAAGTAG
AGACCGAGCAGGAGAGGCTTGCCAGGCTTGAAAAAGAGAGAACGGAAGCAGAAAAGCGCCATGAGACCGAGAAGGAAAGG
CTTGCCGGGTTAGGAACAGGGGGTGTAATGGCAGCAAAAGGAGCGGAAACAGGATATGCAAAAATGGCAAGGACTGAAGG
AATAGCAGGAAGGGAAGGCCCTGAATTCTTATCGGCAAGCACTATAAAAGGGAACAAGGTTGTCAATACAGCCGGCGAGG
ACCTTGGAAAGATAGAAGAATTAATGATCGACCTTGATGAAGGAAGAATAGGATATGCTGTACTGTCTTTTGGCGGATTC
CTCGGTCTGGGCGACAAGTTATTTTCTATTCCCTGGAACTCTCTATCATTGAGAGTACACGAGCATTCCTTCGTACTTGA
CGTTCCTAAAGAAACACTTGAAAAAGCAGAAGGTTTTGATAAGGACAACTGGCCTGTAACTACCCGTGAGAGTCTCTCGC
AGACCTACAATTACTACGGACACGAACCTTACTGGCAGAGAGAGGCGACTGAAAGGACAGGGCTTCCCGGAGAGATAGGC
TCAGAAAGGGTTTCCGGAAAAGATGTTACAGCGGGCAGAGAAAGTCCGGAATTCCTTTCAGCAGGCACTATCAAAGGGGA
TAAAGTCATCAATACGGAAGGGGAGGACCTTGGAAAGATTGAAGAATTGATGATCGACCTTGATGATGGAAGAGTGGGAT
ATGCTGTACTGTCCTTTGGCGGATTCCTTGGCATGGGAGACAAACTGTTTGCCATCCCCTGGAAGGCACTTTCTTTGAAG
GTTCACGAACACGCCTTTGTCCTTAATATTCCTAAAGATGTCCTGAAGGATGCAGAAGGCTTTGATAAGGACAGATGGCC
CTTAACCCGTGACAGCCTATTCAGGACCTATACCTACTATGGATACCAGCCGTACTGGCAGAAAAGAGAAACGGCTGAAG
TAACCGGAGTGACAGGGGAGACTGCCGAAAGTCCCAGGGAAAGAGAGCCGGCAAGAATGGAGAGACGGGCTCAAAGCGAA
AGCCACGGGCAGCTAAAAACCGCAGAGGAAAAAATGGCACAGCAGGATAAAGAAAGAATTAAAAGAATGGAGGAGACCGA
GACAGATAAAGAGAAACTTGAACGCCTGGAAAGGGAACGCACGGTAGCAGAAAGAAGGGAGAAGAAATATCAGTAA

Upstream 100 bases:

>100_bases
AGTCTGAAAAGTCAGGATGAAGTAGATCCGATATACGTTTTATGTTTTTTTCAGAATACGTGTACTTTAGAACATCTTTT
TAATTTAGGGAGTTGGAACT

Downstream 100 bases:

>100_bases
TAAAGGATCCGGGGAGGCATTATCTATCTCCCTGAATTCAATTTTTTCTATCTTTTTTTCTTTTTTACATTTTACCGGTC
ATGTTTTCTGGAATATACTT

Product: hypothetical protein

Products: NA

Alternate protein names: PRC-Barrel Domain Protein; PRC-Barrel; Antigen

Number of amino acids: Translated: 851; Mature: 850

Protein sequence:

>851_residues
MAHRDNPEFLSASTIKGDKVVNTAGEDLGKIEELMIDVDDGRIAYAALSFGGFLGMGNKLFAIPWQALKLRLHEHTFLLD
IPKETLERAEGFDKDNWPAADREWLSDTYTYYGYQPYWQRRAEEQTEIRGEVGAERLSRESASENPIFLSADSIKGNKVV
NRDGNDIGKIDEIMIDLQDGNVAYAAVSHGGILGIGSKLFAIPWKAFSLRIRDNAFILDIPEETFDKAEGFDKSHWPLTR
QELSGTFTHYGFEPYWQAAAVGAGVSAGVMGETEAEKMSRMERERKGLVKTDEELKARQERERLEGLKETQEEKISRLEQ
ERMERERQTETERERLSRLEKEQMELENQSRVEKEKLAGLEKELQESIRLEETEKVSRLEKEVNLLQGQEQSRRERLAQL
ESERARVGKLEETEKERLARLEKERMEAERREESEKERLARLEKERMEAERKVETEQERLARLEKERTEAEKRHETEKER
LAGLGTGGVMAAKGAETGYAKMARTEGIAGREGPEFLSASTIKGNKVVNTAGEDLGKIEELMIDLDEGRIGYAVLSFGGF
LGLGDKLFSIPWNSLSLRVHEHSFVLDVPKETLEKAEGFDKDNWPVTTRESLSQTYNYYGHEPYWQREATERTGLPGEIG
SERVSGKDVTAGRESPEFLSAGTIKGDKVINTEGEDLGKIEELMIDLDDGRVGYAVLSFGGFLGMGDKLFAIPWKALSLK
VHEHAFVLNIPKDVLKDAEGFDKDRWPLTRDSLFRTYTYYGYQPYWQKRETAEVTGVTGETAESPREREPARMERRAQSE
SHGQLKTAEEKMAQQDKERIKRMEETETDKEKLERLERERTVAERREKKYQ

Sequences:

>Translated_851_residues
MAHRDNPEFLSASTIKGDKVVNTAGEDLGKIEELMIDVDDGRIAYAALSFGGFLGMGNKLFAIPWQALKLRLHEHTFLLD
IPKETLERAEGFDKDNWPAADREWLSDTYTYYGYQPYWQRRAEEQTEIRGEVGAERLSRESASENPIFLSADSIKGNKVV
NRDGNDIGKIDEIMIDLQDGNVAYAAVSHGGILGIGSKLFAIPWKAFSLRIRDNAFILDIPEETFDKAEGFDKSHWPLTR
QELSGTFTHYGFEPYWQAAAVGAGVSAGVMGETEAEKMSRMERERKGLVKTDEELKARQERERLEGLKETQEEKISRLEQ
ERMERERQTETERERLSRLEKEQMELENQSRVEKEKLAGLEKELQESIRLEETEKVSRLEKEVNLLQGQEQSRRERLAQL
ESERARVGKLEETEKERLARLEKERMEAERREESEKERLARLEKERMEAERKVETEQERLARLEKERTEAEKRHETEKER
LAGLGTGGVMAAKGAETGYAKMARTEGIAGREGPEFLSASTIKGNKVVNTAGEDLGKIEELMIDLDEGRIGYAVLSFGGF
LGLGDKLFSIPWNSLSLRVHEHSFVLDVPKETLEKAEGFDKDNWPVTTRESLSQTYNYYGHEPYWQREATERTGLPGEIG
SERVSGKDVTAGRESPEFLSAGTIKGDKVINTEGEDLGKIEELMIDLDDGRVGYAVLSFGGFLGMGDKLFAIPWKALSLK
VHEHAFVLNIPKDVLKDAEGFDKDRWPLTRDSLFRTYTYYGYQPYWQKRETAEVTGVTGETAESPREREPARMERRAQSE
SHGQLKTAEEKMAQQDKERIKRMEETETDKEKLERLERERTVAERREKKYQ
>Mature_850_residues
AHRDNPEFLSASTIKGDKVVNTAGEDLGKIEELMIDVDDGRIAYAALSFGGFLGMGNKLFAIPWQALKLRLHEHTFLLDI
PKETLERAEGFDKDNWPAADREWLSDTYTYYGYQPYWQRRAEEQTEIRGEVGAERLSRESASENPIFLSADSIKGNKVVN
RDGNDIGKIDEIMIDLQDGNVAYAAVSHGGILGIGSKLFAIPWKAFSLRIRDNAFILDIPEETFDKAEGFDKSHWPLTRQ
ELSGTFTHYGFEPYWQAAAVGAGVSAGVMGETEAEKMSRMERERKGLVKTDEELKARQERERLEGLKETQEEKISRLEQE
RMERERQTETERERLSRLEKEQMELENQSRVEKEKLAGLEKELQESIRLEETEKVSRLEKEVNLLQGQEQSRRERLAQLE
SERARVGKLEETEKERLARLEKERMEAERREESEKERLARLEKERMEAERKVETEQERLARLEKERTEAEKRHETEKERL
AGLGTGGVMAAKGAETGYAKMARTEGIAGREGPEFLSASTIKGNKVVNTAGEDLGKIEELMIDLDEGRIGYAVLSFGGFL
GLGDKLFSIPWNSLSLRVHEHSFVLDVPKETLEKAEGFDKDNWPVTTRESLSQTYNYYGHEPYWQREATERTGLPGEIGS
ERVSGKDVTAGRESPEFLSAGTIKGDKVINTEGEDLGKIEELMIDLDDGRVGYAVLSFGGFLGMGDKLFAIPWKALSLKV
HEHAFVLNIPKDVLKDAEGFDKDRWPLTRDSLFRTYTYYGYQPYWQKRETAEVTGVTGETAESPREREPARMERRAQSES
HGQLKTAEEKMAQQDKERIKRMEETETDKEKLERLERERTVAERREKKYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97457; Mature: 97326

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHRDNPEFLSASTIKGDKVVNTAGEDLGKIEELMIDVDDGRIAYAALSFGGFLGMGNKL
CCCCCCCCCEECCCCCCCHHCCHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHCCCCCE
FAIPWQALKLRLHEHTFLLDIPKETLERAEGFDKDNWPAADREWLSDTYTYYGYQPYWQR
EECCHHHHHHHHHCCEEEEECCHHHHHHHCCCCCCCCCCCCHHHHHCCHHCCCCCHHHHH
RAEEQTEIRGEVGAERLSRESASENPIFLSADSIKGNKVVNRDGNDIGKIDEIMIDLQDG
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCCHHHEEEEECCC
NVAYAAVSHGGILGIGSKLFAIPWKAFSLRIRDNAFILDIPEETFDKAEGFDKSHWPLTR
CEEEEEECCCCEEEECCCCEEECCEEEEEEEECCEEEEECCHHHHHHHCCCCCCCCCCCH
QELSGTFTHYGFEPYWQAAAVGAGVSAGVMGETEAEKMSRMERERKGLVKTDEELKARQE
HHHCCCHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RERLEGLKETQEEKISRLEQERMERERQTETERERLSRLEKEQMELENQSRVEKEKLAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKELQESIRLEETEKVSRLEKEVNLLQGQEQSRRERLAQLESERARVGKLEETEKERLAR
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LEKERMEAERREESEKERLARLEKERMEAERKVETEQERLARLEKERTEAEKRHETEKER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGLGTGGVMAAKGAETGYAKMARTEGIAGREGPEFLSASTIKGNKVVNTAGEDLGKIEE
HHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCEEECCCHHHHHHHHH
LMIDLDEGRIGYAVLSFGGFLGLGDKLFSIPWNSLSLRVHEHSFVLDVPKETLEKAEGFD
HHHCCCCCCCHHHHHHHCCHHCCCCHHEECCCCCEEEEEECCEEEEECCHHHHHHHCCCC
KDNWPVTTRESLSQTYNYYGHEPYWQREATERTGLPGEIGSERVSGKDVTAGRESPEFLS
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
AGTIKGDKVINTEGEDLGKIEELMIDLDDGRVGYAVLSFGGFLGMGDKLFAIPWKALSLK
CCCCCCCEEECCCCCHHHHHHHHHEECCCCCHHHHHHHHCHHHCCCCCEEECCHHHHEEE
VHEHAFVLNIPKDVLKDAEGFDKDRWPLTRDSLFRTYTYYGYQPYWQKRETAEVTGVTGE
EECCEEEEECCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCEECCCCC
TAESPREREPARMERRAQSESHGQLKTAEEKMAQQDKERIKRMEETETDKEKLERLERER
CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TVAERREKKYQ
HHHHHHHHCCC
>Mature Secondary Structure 
AHRDNPEFLSASTIKGDKVVNTAGEDLGKIEELMIDVDDGRIAYAALSFGGFLGMGNKL
CCCCCCCCEECCCCCCCHHCCHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHCCCCCE
FAIPWQALKLRLHEHTFLLDIPKETLERAEGFDKDNWPAADREWLSDTYTYYGYQPYWQR
EECCHHHHHHHHHCCEEEEECCHHHHHHHCCCCCCCCCCCCHHHHHCCHHCCCCCHHHHH
RAEEQTEIRGEVGAERLSRESASENPIFLSADSIKGNKVVNRDGNDIGKIDEIMIDLQDG
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCCCHHHEEEEECCC
NVAYAAVSHGGILGIGSKLFAIPWKAFSLRIRDNAFILDIPEETFDKAEGFDKSHWPLTR
CEEEEEECCCCEEEECCCCEEECCEEEEEEEECCEEEEECCHHHHHHHCCCCCCCCCCCH
QELSGTFTHYGFEPYWQAAAVGAGVSAGVMGETEAEKMSRMERERKGLVKTDEELKARQE
HHHCCCHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RERLEGLKETQEEKISRLEQERMERERQTETERERLSRLEKEQMELENQSRVEKEKLAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKELQESIRLEETEKVSRLEKEVNLLQGQEQSRRERLAQLESERARVGKLEETEKERLAR
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LEKERMEAERREESEKERLARLEKERMEAERKVETEQERLARLEKERTEAEKRHETEKER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGLGTGGVMAAKGAETGYAKMARTEGIAGREGPEFLSASTIKGNKVVNTAGEDLGKIEE
HHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCEEECCCHHHHHHHHH
LMIDLDEGRIGYAVLSFGGFLGLGDKLFSIPWNSLSLRVHEHSFVLDVPKETLEKAEGFD
HHHCCCCCCCHHHHHHHCCHHCCCCHHEECCCCCEEEEEECCEEEEECCHHHHHHHCCCC
KDNWPVTTRESLSQTYNYYGHEPYWQREATERTGLPGEIGSERVSGKDVTAGRESPEFLS
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
AGTIKGDKVINTEGEDLGKIEELMIDLDDGRVGYAVLSFGGFLGMGDKLFAIPWKALSLK
CCCCCCCEEECCCCCHHHHHHHHHEECCCCCHHHHHHHHCHHHCCCCCEEECCHHHHEEE
VHEHAFVLNIPKDVLKDAEGFDKDRWPLTRDSLFRTYTYYGYQPYWQKRETAEVTGVTGE
EECCEEEEECCHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCEECCCCC
TAESPREREPARMERRAQSESHGQLKTAEEKMAQQDKERIKRMEETETDKEKLERLERER
CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TVAERREKKYQ
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA